| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH820_2324 |
|---|
| Symbol | rocR2 |
|---|
| ID | 7191631 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH820 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011773 |
|---|
| Strand | + |
|---|
| Start bp | 2209975 |
|---|
| End bp | 2211354 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 643555735 |
|---|
| Product | arginine utilization regulatory protein RocR |
|---|
| Protein accession | YP_002451274 |
|---|
| Protein GI | 218903440 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 178 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTAGCAG TTTCGACACA AGAAGTCATT GAAGCGATTT TGGGCAGTAT TGATGAGGCT
ATACACGCAG TAGATGAAAA TGGTATTACA ATTTTCTATA ATACTGTAGC TGCAAAACAC
GATGGATCAA AAATTGAAAA AGTGTTAGGT AAACATTTGT TAGAAGCGTT CCCTTCTTTA
TCTAGGGAAA CAAGTACGTT GATGAAAGTG TTAGATACAA AAAAACCAAT CGTTCATCAA
GTGCAGCATT ATCAAAATTT AAATGGAGAA GACATTTGCA CAGTAAATAC GACGTTACCT
ATTCTTATAG ATGGAAACAT TGCTGGTGCT GTTGAAATTG CAAAGGATTA TTCCACAGTT
CAAAAGCTTA CAGATACAAT AGTCGATTTG CAGTCGAAAA TAAAGCGGTC ATCTAGAAAA
AAAGCAATCA AAAAGCATGT TGCATTTGAG ACAATCGTAA CGAATGACGC TCGGTTTAAA
CAGACGAAAG AATTAGCACA AAAAGTAGCT CCAACTGATG CGAATGTTTT AATATATGGG
GAAACAGGAA CAGGGAAAGA GTTATTTGTA CAAGCGATTC ATGAAGCTTC TAAACGGAAA
AACAAGCCGT TTATTGCACA AAACTGCGCA GCTTTGCCAG AGTCTCTATT AGAAAGTTTA
TTGTTTGGAA CGACGAAGGG TAGTTATACT GGGGCAATTG AACGAGCGGG GTTATTTGAA
CTTGTAGATG GAGGGACATT GTTTTTAGAT GAACTGAATT CAATGCCACT CGATTTACAA
GCGAAAATGC TACGTGTATT AGAAGATGGT GTTATTCGTC GTATTGGTGA TAATAAGACG
AGAAAAGTAG ATGTTCGCGT TATTACGGCA ATGAATCAGC CGCCAGAAGT ATGTTTAAAA
GAGAATAAAA TTCGCACTGA TTTATACTAT CGATTAAATG TCTTTTCATT ATATATTCCG
CCGCTCCGTG AAAGAACGGA GGACGTATTA TTATTAGCGT CTTATTTTTT GAAAGAATAT
AATAAAAGTT ATAAAAAAGG TGTACTTCAA ATGGATAAGG AAGCGAAAGA AAGACTACAA
TCTTACCAAT GGCCTGGAAA TGTTCGGGAG CTAAAACATA CGATTGAACA TGCTGTCATT
ATTGCAGAAG GGAATACATT AACAGCCAAT TGTTTACCGC GTACATTTCG GAAAGAGAGT
TTTCCGAAGA AGAAAAGCAT ATTGCCGCTT AGAGAAGCAC TTCATCAAAC AGAAAAAGAA
TTAATAGATC AAGCGTTAAT TGAAACGGAA GGGAATATAC TACAAGCTGC AAAAATGTTA
GGCATCCCTC GTCAAACGCT TCAATATAAA CTGAGTAAGT ACGACAAAAC CGCCGAATAA
|
|---|
| Protein sequence | MLAVSTQEVI EAILGSIDEA IHAVDENGIT IFYNTVAAKH DGSKIEKVLG KHLLEAFPSL
SRETSTLMKV LDTKKPIVHQ VQHYQNLNGE DICTVNTTLP ILIDGNIAGA VEIAKDYSTV
QKLTDTIVDL QSKIKRSSRK KAIKKHVAFE TIVTNDARFK QTKELAQKVA PTDANVLIYG
ETGTGKELFV QAIHEASKRK NKPFIAQNCA ALPESLLESL LFGTTKGSYT GAIERAGLFE
LVDGGTLFLD ELNSMPLDLQ AKMLRVLEDG VIRRIGDNKT RKVDVRVITA MNQPPEVCLK
ENKIRTDLYY RLNVFSLYIP PLRERTEDVL LLASYFLKEY NKSYKKGVLQ MDKEAKERLQ
SYQWPGNVRE LKHTIEHAVI IAEGNTLTAN CLPRTFRKES FPKKKSILPL REALHQTEKE
LIDQALIETE GNILQAAKML GIPRQTLQYK LSKYDKTAE
|
|---|
| |