| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH820_2306 |
|---|
| Symbol | |
|---|
| ID | 7188569 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH820 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011773 |
|---|
| Strand | + |
|---|
| Start bp | 2189583 |
|---|
| End bp | 2191094 |
|---|
| Gene Length | 1512 bp |
|---|
| Protein Length | 503 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 643555717 |
|---|
| Product | glycine betaine/L-proline ABC transporter, permease and substrate-binding protein |
|---|
| Protein accession | YP_002451256 |
|---|
| Protein GI | 218903422 |
|---|
| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component
[COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 136 |
|---|
| Fosmid unclonability p-value | 0.816481 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACTGATT TTATACAAAC GTTTCAAGAA CGAAAAATAG AATTACTAAC TGCATTAAGT
GAGCATTTAC AAATATCGCT TATTTCATTA TTTTTTGCAG TAATTATTGC GGTACCGCTT
GGCATTTTAT TAACGAGAAA AGAAAGAATG GCTGAGTTGA TTATAGGAAC TTCTGCAGTT
ATGCAGACCG TCCCATCACT TGCATTACTC GGACTATTAA TTCCGTTGGT AGGAATCGGA
AAAATCCCGG CCGTTATTGC ATTAGTTGTA TATGCACTAT TACCTATTTT ACGCAATACA
TATACAGGAA TACGGGAGTT AGATGAATCT TTAATCGAAG CAGCGAAAGC TATGGGGATG
AATAGTTGGA GAAGACTGTG GAAGGTAGAG CTTCCTCTTG CCTTACCAAT TATTATGGCC
GGTATTCGTA CGGCAATGGT ATTAATTGTT GGAACAGCTA CATTGGCAGC TCTTATAGGT
GCTGGTGGAC TCGGTAAACT CATATTACTT GGTATTGATC GGAATGATCA TGCACTTATT
ATTTTAGGGG CCGTACCAGC CGCGTTACTC GCTTTATTCT TTGATGTAGT ACTTCGAGTG
CTTGAGAAGC CAAAACGCTC GTCTAAGCGT GTTATATTGA CGATATGTAT CGTTTGTATA
ATGGTTGCTT CTCCATTTCT TTGGAATACA GAAAAGAAAG ATATTGTTAT TGCGGGCAAA
CTTGGATCAG AACCTGAAAT TTTAGTTCAA ATGTATAAGC AGCTTATTGA ACAAGATACC
GATTTACACG TACAATTAAA ACCAGGTCTT GGAAAAACAG CATTTGTATT TGAAGCGTTG
AAATCAGGAG AAGTAGATAT ATATCCTGAG TTTTCGGGAA CAGCTTTATC TACTTTCGTG
AAAGAAGAGC CAAAAAGTAC AAATCGGGAT GAAGTATATG AGCAGGCTCG CGTTGGAATG
GAAAAGAAAT ATAATATGGT TATGTTGAAG CCGATGGAGT ATAACAATAC ATATGCACTG
GCTATGCCGA AAAAAATAGC AGATCAAAAT AATATAAATA CAATCTCTGA TTTAGGAAAT
ATTGCACAGG ATACGAAAGT AGGATTCACA TTAGAATTTG CTGATCGTGA AGACGGTTAT
AAAGGAATGC AAAAGTTATA TAACTATAAG TTTTCAAATG TGAAAACGAT GGAACCGAAA
TTACGTTACA GTGCAATTCA ATCAGGGGAT GTTAACGTAA TCGATGCATA TTCAACAGAT
AGTGAATTGG AGCAATACGG ACTTAAAGTG CTAAAAGATG ATAAAGGGTT ATTCCCACCA
TACCAAGGTG CACCATTATT AAGAAAAGAG ACGTTACAAA AATATCCTGA ACTTGAAAAA
GTATTAAATA AATTATCTGG AAAGATTACA GATGAAGAAA TGCGAAAAAT GAATTATGAA
GTAAATGTGA ATGGTAAAAA TAGTGAAGAA GTAGCGAAAC AATTTTTACA AAAAGAGAAT
TTACTTCGTT AA
|
|---|
| Protein sequence | MTDFIQTFQE RKIELLTALS EHLQISLISL FFAVIIAVPL GILLTRKERM AELIIGTSAV
MQTVPSLALL GLLIPLVGIG KIPAVIALVV YALLPILRNT YTGIRELDES LIEAAKAMGM
NSWRRLWKVE LPLALPIIMA GIRTAMVLIV GTATLAALIG AGGLGKLILL GIDRNDHALI
ILGAVPAALL ALFFDVVLRV LEKPKRSSKR VILTICIVCI MVASPFLWNT EKKDIVIAGK
LGSEPEILVQ MYKQLIEQDT DLHVQLKPGL GKTAFVFEAL KSGEVDIYPE FSGTALSTFV
KEEPKSTNRD EVYEQARVGM EKKYNMVMLK PMEYNNTYAL AMPKKIADQN NINTISDLGN
IAQDTKVGFT LEFADREDGY KGMQKLYNYK FSNVKTMEPK LRYSAIQSGD VNVIDAYSTD
SELEQYGLKV LKDDKGLFPP YQGAPLLRKE TLQKYPELEK VLNKLSGKIT DEEMRKMNYE
VNVNGKNSEE VAKQFLQKEN LLR
|
|---|
| |