| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A5594 |
|---|
| Symbol | |
|---|
| ID | 7074909 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | - |
|---|
| Start bp | 5184036 |
|---|
| End bp | 5185082 |
|---|
| Gene Length | 1047 bp |
|---|
| Protein Length | 348 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 643453989 |
|---|
| Product | GGDEF domain protein |
|---|
| Protein accession | YP_002341482 |
|---|
| Protein GI | 217962904 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2199] FOG: GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAAGGG ACTTATTTGT AAACACAACA ATTATTCTTT CCTTTATTTT TATTGGAGGT
CAGCTTTTAA GAGATAAACC GTTAAAAGAA GAGTTCTCTT TTTGGCAGAA ATGTGTAGTA
GGTATTTTTA CTGGAATATT AAGTGTACTG TTGATGTACT TTGGCGTACA TATTGAGAAT
ATTATGTTAG ATCTACGCTA TTTAGCTGTT ATTTTGGCAA TTATAATTGG AGGTCCGATA
GCTAGTAGTA TAACAGTTAC GATTATTTTA ATTACCCGAT TATTTTTAAC CGAGTACTCT
TTAGCCTCTG AATTGGCTTG TTATACTATT GTATTGATAG GTGTTGGAAT TATTTTTATT
TGGCGGATGA AAGCTTCTAT ATTTATAAGG TGGATCTGGT TTAATGTATA TAGTTTATCT
ATTTTAATAG TGCCACTTTC TATGTTATTT AAAGATATGT CTATAGTAGC ATTATATTTA
GTTTGTAGTA GTGTAGCGGC ATATATCACA TTTATAAGCG CAAATTATGT ATTGCAATCC
AATGAGTTAT TTCAAAAGAT GAAGCAATAT GCAACGATAG ATGCATTGAC AGGGTTAGGA
AACGTAAGGC AGTTTGATTT AGAAATGAAT CATCATATTG GTAATAAGCG CATGAAAAAT
GATTCACTTT GTTTACTACT TATAGATATT GATCATTTTA AGTCTACGTA CGGGCATCCT
GCAGGAGATG AAGTATTAAA ACAAATAGGG CGTATTTTAC GAGAAGTTTC AACGTTTCCA
GATTTGGCTT TTCGAAAGGG TGGAGAGGAG TTCGCGCTTC TTATACCACA GAAGGGATTA
GCTTACGGAA TGCGTATGGG GGAACAAGTT CGCGCAGCTG TTGAAAAACA TTCATTCCAA
TTGTTAGATG GAACAAAAAT AAAAATTACA GTTTCAGTAG GAATTTCAGT ATATGAACAA
TCACCAGAGC AATTTATTCA AGCAGCTGAT GATGCATTAT ATTACTCCAA AAGAAATGGT
AGAAATCAGG TCAGTTCTGC ATCTTAA
|
|---|
| Protein sequence | MLRDLFVNTT IILSFIFIGG QLLRDKPLKE EFSFWQKCVV GIFTGILSVL LMYFGVHIEN
IMLDLRYLAV ILAIIIGGPI ASSITVTIIL ITRLFLTEYS LASELACYTI VLIGVGIIFI
WRMKASIFIR WIWFNVYSLS ILIVPLSMLF KDMSIVALYL VCSSVAAYIT FISANYVLQS
NELFQKMKQY ATIDALTGLG NVRQFDLEMN HHIGNKRMKN DSLCLLLIDI DHFKSTYGHP
AGDEVLKQIG RILREVSTFP DLAFRKGGEE FALLIPQKGL AYGMRMGEQV RAAVEKHSFQ
LLDGTKIKIT VSVGISVYEQ SPEQFIQAAD DALYYSKRNG RNQVSSAS
|
|---|
| |