| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A5398 |
|---|
| Symbol | thiC |
|---|
| ID | 7076654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | - |
|---|
| Start bp | 4983026 |
|---|
| End bp | 4984786 |
|---|
| Gene Length | 1761 bp |
|---|
| Protein Length | 586 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 643453797 |
|---|
| Product | thiamine biosynthesis protein ThiC |
|---|
| Protein accession | YP_002341288 |
|---|
| Protein GI | 217962712 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0422] Thiamine biosynthesis protein ThiC |
|---|
| TIGRFAM ID | [TIGR00190] thiamine biosynthesis protein ThiC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.507246 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAGT CTGTTTCAGC TGAGCAAATT GAATTGAAAT CGAGTTTACC AGGAAGTAAG
AAAGTGTATG TGGATGGACC ACGAGAAGGT ATGAAGGTGC CGATGCGTGA GATTGAACAA
AGCGATACAA ATGGCGTCCC GAATCCGCCA ATTCGTGTGT ATGATACGAG CGGTCCTTAT
ACGGATCCCG CGTATAAAGT GGAGCTGGAA AAGGGGATTC CAACGCCGCG CCACTCTTGG
ATCCTAGAGC GCGGAGATGT AGAGGCATAC GAAGGGCGCG AAGTAAAACC AGAGGATGAC
GGTGTGAAGG TGGCTTCGAA ACATACACCT GTCTTCCCGC AGATGGATCG CAAACCGCTT
AGAGCGAAGC AAGGTGCAAA TGTTACGCAA ATGCATTATG CACGTAATGG CATCATTACG
TCTGAGATGG AATATGTTGC GATTCGTGAA GGAGTAGAGC CGGAGTTTGT TCGTAAGGAA
ATTGCGGAAG GTCGCGCTAT TTTACCAGCA AATATTAACC ATCCGGAAGC AGAGCCGATG
ATTATTGGAC GTAATTTCCA CGTGAAGGTG AATGCAAATA TCGGAAACTC TGCTGTATCT
TCTTCTATCG CGGAAGAAGT AGAGAAGATG ACATGGGCTA CTCGCTGGGG TGCAGATACG
ATTATGGATT TATCTACAGG TAAAAACATT CATACGACGC GTGAGTGGAT TATTCGTAAC
GCGCCTGTAC CAGTTGGAAC TGTACCGATC TATCAAGCTC TTGAAAAAGT AAACGGAATT
GCAGAAGATT TAACGTGGGA AGTGTATCGT GATACGTTAA TTGAGCAAGC GGAGCAAGGC
GTAGATTACT TTACGATTCA CGCTGGTGTA TTACTTCGTT ACATTCCAAT TACTGCAAAG
CGTACGACAG GTATCGTTTC GCGCGGTGGT TCGATTATGG CGCAGTGGTG TTTATTCCAT
CATAAAGAAA ACTTCCTATA CACTCATTTT GAAGAGATTT GTGAAATTAT GAAGCAGTAT
GATGTTTCGT TCTCTCTTGG AGATGGATTA CGCCCAGGTT CAATTGCAGA TGCAAATGAC
GAAGCACAGT TCTCTGAGCT TGAAACACTT GGTGAATTAA CGAAGATCGC TTGGAAACAT
GATGTGCAAG TGATGATTGA AGGGCCTGGG CATGTACCGA TGCATTTAAT TAAAGAAAAT
ATGGAGAAAG AGCTTGATAT TTGTCAGGGC GCGCCATTCT ATACACTTGG GCCTTTAACG
ACAGATATTG CACCAGGTTA TGACCATATT ACATCCGCAA TAGGAGCTGC GATGATTGGC
TGGTTTGGGA CGGCGATGCT TTGTTATGTA ACGCCGAAAG AACATTTAGG TTTACCGAAT
AAAGATGATG TACGCGAAGG TGTTATTACG TACAAAATCG CTGCGCATGC GGCCGATCTG
GCGAAAGGGC ACAAAACGGC TCATCAGCGC GATGATGCAC TTTCAAAAGC TCGCTTTGAA
TTCCGTTGGC GCGATCAATT TAATTTATCT TTAGATCCTG AACGTGCGAT GGAATATCAC
GATGAAACAT TGCCGGCAGA AGGCGCAAAA ACAGCTCATT TCTGTTCCAT GTGTGGACCG
AAGTTTTGTA GTATGAGAAT TTCACATGAT ATTCGTGAAT ACGCGAAAGA AAATGATTTA
GAAACGACAG AAGCAATTGA AAAGGGAATG AAAGAGAAAG CGAAAGAATT TAAAGACACT
GGTAGTCATT TATACCAATA A
|
|---|
| Protein sequence | MKQSVSAEQI ELKSSLPGSK KVYVDGPREG MKVPMREIEQ SDTNGVPNPP IRVYDTSGPY
TDPAYKVELE KGIPTPRHSW ILERGDVEAY EGREVKPEDD GVKVASKHTP VFPQMDRKPL
RAKQGANVTQ MHYARNGIIT SEMEYVAIRE GVEPEFVRKE IAEGRAILPA NINHPEAEPM
IIGRNFHVKV NANIGNSAVS SSIAEEVEKM TWATRWGADT IMDLSTGKNI HTTREWIIRN
APVPVGTVPI YQALEKVNGI AEDLTWEVYR DTLIEQAEQG VDYFTIHAGV LLRYIPITAK
RTTGIVSRGG SIMAQWCLFH HKENFLYTHF EEICEIMKQY DVSFSLGDGL RPGSIADAND
EAQFSELETL GELTKIAWKH DVQVMIEGPG HVPMHLIKEN MEKELDICQG APFYTLGPLT
TDIAPGYDHI TSAIGAAMIG WFGTAMLCYV TPKEHLGLPN KDDVREGVIT YKIAAHAADL
AKGHKTAHQR DDALSKARFE FRWRDQFNLS LDPERAMEYH DETLPAEGAK TAHFCSMCGP
KFCSMRISHD IREYAKENDL ETTEAIEKGM KEKAKEFKDT GSHLYQ
|
|---|
| |