Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BCAH187_A5079 |
Symbol | dapF |
ID | 7073585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bacillus cereus AH187 |
Kingdom | Bacteria |
Replicon accession | NC_011658 |
Strand | - |
Start bp | 4693331 |
End bp | 4694197 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 643453486 |
Product | diaminopimelate epimerase |
Protein accession | YP_002340974 |
Protein GI | 217962402 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0253] Diaminopimelate epimerase |
TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCCAAT TTTCTTTTAC AAAAATGCAT GGTCTTGGCA ATAGTTATAT ATATGTAAAT ATGTTTGAAG AACAAATTCC TGAAGAAGAT TTAGCTCTTG TGGCGGAAAA GGTTTCAAAT ATTAATACTG GTATTGGAGC AGATGGAATG ATTTTAATTT GTCCGTCTGA CGTAGCGCCG GTGAAAATGC GCATGTTTAA TAATGATGGA TCAGAAGGAA AGAGCTGTGG TAACGGTCTA CGCTGCGTAG CGAAATATGC GTATGAGCAT AAACTAGTAG AAGATACAGT TTTCACAATT GAAACGTTAG CTGGCATTGT AACGGCTGAA GTAACGGTAG AAGAAGGGAA AGTTACGTTA GCGAAAATTG ATATGGGAGC ACCGCGTTTA ACGCGTGCAG AAATACCGAT GCTTGGTGAA GGTGAAACAC CATTTATTCG TGAAAACTTC TTATACAATA ACCATCGTTA TGCATTTACA GCTGTTTCAA TGGGAAATCC GCATGCAGTT ATTTTTGTGG ATGATGTAGA ACAAGCACCT CTTACAACAC TTGGACCAGT TCTTGAGACA CACGAAATGT TCCCAGAACG AGTAAATGTT GAATTCATTG AGATTTTGAA TGAGGAAGAG ATGAACTTCC GCGTTTGGGA ACGTGGATCT GGTGTAACAC AAGCTTGCGG AACAGGGGCG TGCGCTGCAG TTGTAGCCTC TATTTTAAAT GGAAAAATGG AACGTGGTAA GGAAATTACA GTTCATTTAG CTGGTGGCGA TTTAATGATT GCATGGACAG AAGAAGGCAA CGTGTTAATG AAAGGACCAG CAGAAGTAAT TTGCCACGGA GTGTATGAGT ACAAGATAGA AGCGTAA
|
Protein sequence | MSQFSFTKMH GLGNSYIYVN MFEEQIPEED LALVAEKVSN INTGIGADGM ILICPSDVAP VKMRMFNNDG SEGKSCGNGL RCVAKYAYEH KLVEDTVFTI ETLAGIVTAE VTVEEGKVTL AKIDMGAPRL TRAEIPMLGE GETPFIRENF LYNNHRYAFT AVSMGNPHAV IFVDDVEQAP LTTLGPVLET HEMFPERVNV EFIEILNEEE MNFRVWERGS GVTQACGTGA CAAVVASILN GKMERGKEIT VHLAGGDLMI AWTEEGNVLM KGPAEVICHG VYEYKIEA
|
| |