| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A3229 |
|---|
| Symbol | lolD |
|---|
| ID | 7077544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | - |
|---|
| Start bp | 3003330 |
|---|
| End bp | 3003845 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 643451671 |
|---|
| Product | ABC transporter, ATP-binding protein |
|---|
| Protein accession | YP_002339178 |
|---|
| Protein GI | 217960614 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.24568 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGAAG AAAAGCTAGC TGATTTCCGT GCAAAAAAGA TTGGTTTTGT TTTTCAATCG
TATAATTTAA TCACAACAAT GACCGCTCAA GAAAATGTTA TGATGGCACT TATGTGCGCT
GGAGTAAGAA GCCAAAAAGA AATGATAACA AAGTCTAGGG AAATGTTGGA CCTTGTTGGG
ATGAAAGAAC GATATCATCA TTTACCAAGC CAGCTATCTG GAGGTCAACA ACAGCGTGTA
GCAATTGCTC GTGCATTAGT AAATAATCCA GCCATTGTTA TTGCTGATGA ACCAACTGGG
AACTTAGATT CCAAAACAGG AAAAAATATT TTGGACTTAA TTTTTCAACT ACGTGACCAA
CTCCAGATGA CGTTTATTAT TGCTACACAT GATACGCATG TGGCAAAACT TTCAGATCGT
GTTTTAAAAA TGGAAGATGG CCTCCTCGTT CAAGAAACCT TTAACGACCA TACAAAATCT
AGTGAGCAAG AAGGTGGCAT AACACCATGC TACTAA
|
|---|
| Protein sequence | MSEEKLADFR AKKIGFVFQS YNLITTMTAQ ENVMMALMCA GVRSQKEMIT KSREMLDLVG
MKERYHHLPS QLSGGQQQRV AIARALVNNP AIVIADEPTG NLDSKTGKNI LDLIFQLRDQ
LQMTFIIATH DTHVAKLSDR VLKMEDGLLV QETFNDHTKS SEQEGGITPC Y
|
|---|
| |