| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A1952 |
|---|
| Symbol | |
|---|
| ID | 7075388 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | - |
|---|
| Start bp | 1809760 |
|---|
| End bp | 1811400 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 643450415 |
|---|
| Product | putative oligopeptide ABC transporter, oligopeptide-binding protein |
|---|
| Protein accession | YP_002337906 |
|---|
| Protein GI | 217959358 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA AAACAAAGGG AATCGTTGCA CTCTCAATCA CATTATCTAT ATTTTTAACA
GCATGTGGTC AAAAACAAGA GGCAACAACT ACTGGAGAAA AGAAAAAAGA ATCTTCAAAA
CAATTATTAA ACATTGTAGA AGCTGGGGAA ATTTCTACAC TTGATTCATC TATCGCAACC
GATGGGTTTT CTTACGCTGC TTTAAACAAC GTAATGGAAG GATTATATAT GCCTGGGCCT
GACAATAAAC CTGTTCCTGC AGCAGCTGAA TCATACAAAC TGAGCGAAGA CGGAAAAACA
TATACATTTA CATTACACGA TTCAAAATGG TCAAATGGCG ATCCAGTAAC TGCTCATGAT
TTTGAATATG CATGGAAACG TGCCGTAAAT CCAGAAACTG CTTCTGAATA CGCACATATT
ATGTTCGATA TTAAAAACGC AGAAAAAATA AATAAAAAAG AATTGCCAAT TGACTCATTT
GGTGTAAAAG CAATTGACGA TAAAACATTA GAAGTACAGT TAGAACACCC TGTTCCATAC
TTTTTAGGTT TAATGGGATT TGCAACATTT TATCCTCAAA ACAAAAAGGT TGTAGAAGCA
CAAGGGAAAA ATTACGGACT TGAAGCTGCA AATGTAGTTT ATAACGGACC TTTCCAATTA
AGTGAATGGA AACATGATAC AAGTTATAAA ATGACAAAAA ACCCGAACTA CTGGGATAAT
AAAAATGTGA AATTAAATGA AATTAATGTA AATATCGTAA AAGATACTTC AACAGCTGTT
AATTTATTTG AAAGTAAACA AGTAGACCGA ATTACGATTA ATTCAGAGTT TGTTGATAAA
TATCAAAAAG ATCCGAGCTT AAAGAAGATG GAACGTCCTT CTGTAACGTT TTTCCGATTT
AGTCAAAAGA ACCCTTTATT AGCAAACAAA AATGCTCGTA AAGCTATTTC GCTTGCTTTT
GATAAACAAG GAATCGCAAC AACGATTTTA AACAATGGTT CTATACCTGC GAATGCATTC
GTTCCAAAAG GATTCGTAAA AGGACCTGAC AATAAAGATT TTCGCAGTAC AAGTCATGTA
AAAGTAGAAA CAAATGTGAA AGAAGCTAAA ACACTATGGG AAACTGCGAA AAAAGAAACA
AATTTACAAA ACGCTTCTCT TTCAATCATA ACAACTGATG AATCTAACGA TAAAAAAATT
AGTGAGTTTT TAAAAGGTGA ACTGGAGAAA AACTTACCTG GATTAAAAAT CACATTACAA
CCACTTCCAG TAAAAGCATT TTTAGATCGT GAAGGAAATG GTGATTTTGA AATTTCACTT
TCTACATGGG GACCAGATTA TCCTGATCCT ACAACATTTT TAAATATGTT CGTCACAGAC
GGACCGTTTA ATAAGATGAG TTACTCAAAC AAACAATACG ACGAATTAAT TGAGAAAACG
AGCTCTACTT TAGTAACTGA CTTACCAGCA CGTTGGAAAG CGTTCCAAGA TGCAGAGAAA
ATCTTACTTG AAGATGATGC AGCTATCGCT CCAATCTTCC AATCAGGACT TGTATATTTA
GAACGTCCAA CAGTAAAAGG TGTTGTTGTT CGTCCATTTG CAGGAATTTA TTCTTATAAG
TGGGCCTCTA TTACGGAATA A
|
|---|
| Protein sequence | MKKKTKGIVA LSITLSIFLT ACGQKQEATT TGEKKKESSK QLLNIVEAGE ISTLDSSIAT
DGFSYAALNN VMEGLYMPGP DNKPVPAAAE SYKLSEDGKT YTFTLHDSKW SNGDPVTAHD
FEYAWKRAVN PETASEYAHI MFDIKNAEKI NKKELPIDSF GVKAIDDKTL EVQLEHPVPY
FLGLMGFATF YPQNKKVVEA QGKNYGLEAA NVVYNGPFQL SEWKHDTSYK MTKNPNYWDN
KNVKLNEINV NIVKDTSTAV NLFESKQVDR ITINSEFVDK YQKDPSLKKM ERPSVTFFRF
SQKNPLLANK NARKAISLAF DKQGIATTIL NNGSIPANAF VPKGFVKGPD NKDFRSTSHV
KVETNVKEAK TLWETAKKET NLQNASLSII TTDESNDKKI SEFLKGELEK NLPGLKITLQ
PLPVKAFLDR EGNGDFEISL STWGPDYPDP TTFLNMFVTD GPFNKMSYSN KQYDELIEKT
SSTLVTDLPA RWKAFQDAEK ILLEDDAAIA PIFQSGLVYL ERPTVKGVVV RPFAGIYSYK
WASITE
|
|---|
| |