Gene BCAH187_A1202 details

Gene Information

• Locus tag: BCAH187_A1202
• ID: 7073377
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cereus AH187
• Kingdom: Bacteria
• Replicon accession: NC_011658
• Strand: +
• Start bp: 1126038
• End bp: 1126571
• Gene Length: 534 bp
• Protein Length: 177 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 643449680
• Product: RNA polymerase factor sigma C
• Protein accession: YP_002337172
• Protein GI: 217958624
• COG category: [K] Transcription
• COG ID: [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog
• TIGRFAM ID: [TIGR02937] RNA polymerase sigma factor, sigma-70 family

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.00251456
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGATGAAT TAATGATAGA AGCGTTTGAA ATAGAAGATA AGGAGGACCT TATCGACGAA 
ATCATGAACA AGTATGGACA AGAAGTCTTA CAGCTTGTGT ATTCATATGT GAATAATAAA 
GAGGTTGCGG AGGATTTAAC GCAAGATATA TTTGTGAAAT GTTATAAATC TCTTCATACA 
TATAAAGGGA ATTCGAACTT AAAAACATGG CTATGGAGAA TTGCAATTAA TCATTGTAAG 
GACTATTTAA AAAGTTGGTA TAACAAAAAG GTCATCGTGA CAGAGGATGA CTTTACGTAT 
ATGGGGAGTC AAAAAGAAAG TGTGGAACAA ACTGTCATTC AAAATGCGGA GGATCGTGAA 
CTGGCTTCTG CAGTAATGAA TTTACCGATA AAATATCGAG AGGTGATTTA TCTATTTTAT 
TATGAGGAAT TATCAATTAA AGAGGTTGCT ATTGTAATAG AAGTGAAGGA GAACACGATA 
AAAACGAGAC TGAAAAAAGC AAAGGAGCTT TTGAAGAAAG GATTGGAGGA ATAG 

 

Protein sequence

MDELMIEAFE IEDKEDLIDE IMNKYGQEVL QLVYSYVNNK EVAEDLTQDI FVKCYKSLHT 
YKGNSNLKTW LWRIAINHCK DYLKSWYNKK VIVTEDDFTY MGSQKESVEQ TVIQNAEDRE 
LASAVMNLPI KYREVIYLFY YEELSIKEVA IVIEVKENTI KTRLKKAKEL LKKGLEE