| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCAH187_A0624 |
|---|
| Symbol | |
|---|
| ID | 7077304 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus AH187 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011658 |
|---|
| Strand | + |
|---|
| Start bp | 580018 |
|---|
| End bp | 582087 |
|---|
| Gene Length | 2070 bp |
|---|
| Protein Length | 689 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 643449118 |
|---|
| Product | sensory box/GGDEF family protein |
|---|
| Protein accession | YP_002336628 |
|---|
| Protein GI | 217958084 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAC AATATAGTAA TCAAAATACC TTTTTAAGTA TGATAGATAT GGATTTAATA
AGAAGAGGAT TATTACATGC TATTCAAGAT TTAGTATTTA TTGTTAAAGT TATTGATGAT
GAAACATTTA CATATATTTA TGTAAATAAG TTAGGTATGG ATTATGCGAA GCTAAGTGAA
GAATGTTATG GAAAAACTTT TGCAGAAGTA TTACCGGAAG ATACGGCGGA AATATTGCAA
GTGCAATATG CAAAAGTAGC GAGCGAAGCG AAAGCACATA CCTTTTGTGA TGTAGTTAGT
TTACCAACTG GTAATTTACA TTATGAATCT TCACTTAATC CTGTATTTGA TGAAGAAGGA
GTATGTCAGT TTATTATTTG TATTACAAGG GATATCACAG CTCAAATAGA GGAGAAGATG
GAGATAGAGG AAAAACAAAT GCTGTTTAAG TCATTACTAG AATATAATAA TGACTCCATC
ATATCTATAG ATTCTATAGG AAGAATTACA TATGCAAATC CAGCAACGTA TGAAATATTT
GGATACCGAT TTGAAGAATT AAATAATAAG TTTATTTTTG AATTTATTAA TAAAGAATAT
GAAAAAGATT TTCAAATTAT ATTTAAAGAA GCCATGCAAG GAAGGGCAAA GCAAATTGTT
TCAAAGAAAT ATGTTCATAA AGAAGGGTAC GAGCTCTATA TTTCCTTGAG AACTATCCCG
ATTATTGTAA ATGGTGAAAT TGTTGGAGTA TATATTGTTA CAAGGGATGT TACAAAGCAA
ATATTAAATG AAATGAGAAC GGAATATTTA GCTTATTATG ATCAGCTAAC AGGATTAATG
AATAGAATTT CATGTACAAA TAAGTTAAAT GATTTTTTAA ATGAGAAGGT AGCTTTTGCG
TTTATCTTTA TAGATTTAGA TGAATTTCAC CTTATTAATG ATACGTTTGG TCATAAAGAA
GGAGATAAAG TGTTACAAAA AGTTACAGAA TGTTTAAGCA GTTTTCAAAT ACCCGGTATA
CACTTATTTA GAGAACACGA TGATCAATTT GTTATGTTAA TAGAAAATAT AACGAAAGAA
CGTGTAGAGG GAGTTTCCAA AAACATACTG AAAAGGATTA GTGAACATTT TGTAATCGAA
GAAGAGGACG TGTATTTAAG TGCTTCAATC GGAATTGTAA TGGCTCCAAC AGATGGAGAA
GATGAAAAGA TATTATTCCA AAGAGTTGAT GCTGCTTTGG AAAAAGCAAA AGAAAAAGGA
AAAGGGCATT ATCATTTTTA TTGCAGTGGG TTAGATTGTG AGCGTGAACA AAGATTTATA
ATAGAAAACC AATTACATCG TGCTATAGAA AAAAATGAAT TCTTCTTATA TTATCAGCCG
CAAATTAATA TTGAAACGAA AAAAATAGCT AGTATGGAGG CTTTAATAAG GTGGGAGAAT
AAAGAATTAG GATTTGTCTC TCCCAATCAA TTTATTCCGC TAGCAGAAAG AACAGGATTT
ATTATTAAGC TTGATGAATG GGTAGTAAAT GAAGTGTGTC GACAAATACG CGAATGGTTA
AATAAAGGAT ATGAAGTTGT CCCAATTGCA GTTAATATTT CAGCCAGGCA TTTTCGCTCT
ATTACATTAA TAGAGATGAT TACACGAGCT TTACATAAGT ACAATGTACC AGCTCATTTA
TTAGCGATAG AGGTTACAGA AGGAGCCCTT ATACATAAAG ATATATCGAA AAGAGTATTG
CTACAATTAA AAGAACAAAA TTTAAAGATT CATTTAGATG ATTTTGGTAC AGGGTATTCA
TCTTTGAGTT ATTTAAAAAC GTATCCAATT GATACTTTGA AAATTGATCG TTCTTTTATG
GAAGGTATAC ATGTAGATGA ACGCGATACG AATATTACGG CTGCAATTAT TCATCTAGCT
CATACGTTGG AATTGAATGT AATTGCAGAA GGGGTAGAAA AAGCGGAACA AATACAATTT
TTGAAGGAAA AGAATGTGAA GTTTGTACAA GGTTATTATT ATAGCCGCCC TTTATCAAAA
TATGATGTGG AAAATGTGTA TTATAAATAA
|
|---|
| Protein sequence | MKEQYSNQNT FLSMIDMDLI RRGLLHAIQD LVFIVKVIDD ETFTYIYVNK LGMDYAKLSE
ECYGKTFAEV LPEDTAEILQ VQYAKVASEA KAHTFCDVVS LPTGNLHYES SLNPVFDEEG
VCQFIICITR DITAQIEEKM EIEEKQMLFK SLLEYNNDSI ISIDSIGRIT YANPATYEIF
GYRFEELNNK FIFEFINKEY EKDFQIIFKE AMQGRAKQIV SKKYVHKEGY ELYISLRTIP
IIVNGEIVGV YIVTRDVTKQ ILNEMRTEYL AYYDQLTGLM NRISCTNKLN DFLNEKVAFA
FIFIDLDEFH LINDTFGHKE GDKVLQKVTE CLSSFQIPGI HLFREHDDQF VMLIENITKE
RVEGVSKNIL KRISEHFVIE EEDVYLSASI GIVMAPTDGE DEKILFQRVD AALEKAKEKG
KGHYHFYCSG LDCEREQRFI IENQLHRAIE KNEFFLYYQP QINIETKKIA SMEALIRWEN
KELGFVSPNQ FIPLAERTGF IIKLDEWVVN EVCRQIREWL NKGYEVVPIA VNISARHFRS
ITLIEMITRA LHKYNVPAHL LAIEVTEGAL IHKDISKRVL LQLKEQNLKI HLDDFGTGYS
SLSYLKTYPI DTLKIDRSFM EGIHVDERDT NITAAIIHLA HTLELNVIAE GVEKAEQIQF
LKEKNVKFVQ GYYYSRPLSK YDVENVYYK
|
|---|
| |