Gene BBta_p0198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_p0198 
Symbol 
ID5148585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009475 
Strand
Start bp152381 
End bp152881 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content51% 
IMG OID640539095 
Producthypothetical protein 
Protein accessionYP_001220528 
Protein GI148241027 
COG category 
COG ID 
TIGRFAM ID[TIGR02953] pentapeptide MXKDX repeat protein 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCAATAG TGAGCAGTAT TGATCAGTGT TGTCCCATGC GCTTGGCGCA AACTAAATTG 
GTCACCGACC GTCCTCGCCA ATTCGCGTGT GACCGAGAGT TCCGTGACGC TGAAGCGTCA
TGCTCGATCC AAATACCCAA TGTGCTAGAA TACGACAGGC GAGTGTCGAA CATCTATCCG
GTTCTACCTT GCGGCTTGTT GCTGCGAGGA TATGTCTCAA CAGGAGTTTC CCAGATGAAG
AAAGCGATTC TCGTTACTGC TTGCGTTGCT GCAATTTCTG CCTTTACGGC GATCGGCGCG
TCGGCTCAAA CCACCAGCCC TACCGCTCAG GACAACCTGT CGAAGGAAAA GATGGGCAAG
GACGATACGA AGAAGAATGG TATGGAAACC ACGGGGATGA ATAAGGATGG CATGGCCAAA
GACTCTATGG GCAAGGATGG TATGAAGGAC ATGTCGAAAG ATAGTTCACC GAAAGGCATG
AAGAAGGACG GGAGCAAGTA A
 
Protein sequence
MSIVSSIDQC CPMRLAQTKL VTDRPRQFAC DREFRDAEAS CSIQIPNVLE YDRRVSNIYP 
VLPCGLLLRG YVSTGVSQMK KAILVTACVA AISAFTAIGA SAQTTSPTAQ DNLSKEKMGK
DDTKKNGMET TGMNKDGMAK DSMGKDGMKD MSKDSSPKGM KKDGSK