9 homologs were found in PanDaTox collection
for query gene BBta_p0016 on replicon NC_009475
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009475  BBta_p0016  hypothetical protein  100 
 
 
177 aa  353  7.999999999999999e-97  Bradyrhizobium sp. BTAi1  Bacteria  n/a    normal  0.11161 
 
 
-
 
NC_009508  Swit_4935  CopG/DNA-binding domain-containing protein  36.11 
 
 
178 aa  87.8  7e-17  Sphingomonas wittichii RW1  Bacteria  normal  0.291366  normal  0.856659 
 
 
-
 
NC_009432  Rsph17025_4358  hypothetical protein  31.4 
 
 
212 aa  55.5  0.0000004  Rhodobacter sphaeroides ATCC 17025  Bacteria  hitchhiker  0.0000234653  normal  0.657828 
 
 
-
 
NC_009508  Swit_4976  hypothetical protein  31.15 
 
 
131 aa  54.3  0.000001  Sphingomonas wittichii RW1  Bacteria  normal  normal 
 
 
-
 
NC_011723  PCC8801_4545  hypothetical protein  33.71 
 
 
134 aa  50.1  0.00002  Cyanothece sp. PCC 8801  Bacteria  normal  normal  0.663104 
 
 
-
 
NC_008771  Veis_5054  mobilisation protein  32.56 
 
 
193 aa  49.3  0.00003  Verminephrobacter eiseniae EF01-2  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0354  hypothetical protein  35 
 
 
147 aa  41.6  0.006  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_011727  PCC8801_4566  mobilisation protein  30.19 
 
 
121 aa  41.6  0.006  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_009516  PsycPRwf_2405  mobilisation protein  28.79 
 
 
121 aa  41.2  0.007  Psychrobacter sp. PRwf-1  Bacteria  normal  n/a   
 
 
-
 
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