| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7830 |
|---|
| Symbol | |
|---|
| ID | 5151223 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 8214142 |
|---|
| End bp | 8215302 |
|---|
| Gene Length | 1161 bp |
|---|
| Protein Length | 386 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640562454 |
|---|
| Product | putative D-ribose-binding periplasmic protein precursor |
|---|
| Protein accession | YP_001243561 |
|---|
| Protein GI | 148258976 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.298779 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGGAAA CGATGACACC AATCTTGCGA CAAGCCTTGC CTTTGACCGT GTTGATGGCT
GCGGCCGTCT CCGCGATCTC CCCGGCCCGC GCCGACGTGC CCGCGACCTG CGTCAAGGGC
GTCGATCTCG CAAAGCTCGG GCCGAAATCG ATCGTGGGCC AAGGGCCGCA CGGCGAGAAG
GCGGCGTCGC CCGAGGTGCT GGCGCTGTCG GAGGCCGATG CCGCGAAGAT CAAGGAGAAG
CACTTCAAGG TCGGCATCTC GATGCAGACG GTCAACCTCG ACTGGTCGCA GCTCCAGATC
CAGGGCATCA CGGATACGCT GAAGAAGTAC GGCGTGACCG TGACGGGCGT CGCCTCCGCC
GAATATCAGG TGGATAAGCA GATCGCCGAT ATCGAGAACA CCATCCAGCA GCATCCGGAC
GGGATCATTT CGATCCCGGT CGATTTCACC GCGACGGCGC CGACCTACAA GAAGATCGCC
AAGGCGGGCA TCAAGCTCGT GCTGATGGAC AGCATCCCGA CCGGCCTGAA GCACCCCGAG
GAATATGTCA CGATGGTCTC GGCCGACAGC CAGGGCAACG GCCAGATCGC GGCCCAGATT
CTGGCGTCTT GCGTGCCGCA GGGCGCGACG ATCGGCCTCG TGAATTTCGG CGTCGACTAT
TTCAGCACCA ACGAGCGCAC CAAGGGCGTG CGCGAGTGGA TGAAAGCAAA CCGGCCCGAC
ATTAAGATGA AGCAGGTTGA TTTTACCGAT CCGCCAAAGG TCTCGCAGAT CGCGGGCGAC
TTCCTGACCG GCAATCCCGA CGTCAAGGGA CTGTACGCGG TGTGGGATCA GCCGGCACTC
GACACGCTGA GCTCGATGCG GGCCCAGGGC ATCGACATTC CGATGACGAC GGTCGATCTC
GGCCTGCAAT CGGCAATCGA GATTGCCAAG GGCGGTCCGC TGAAGGCGAC CGGCTCGCAG
CGTCCCTATG ACCAGGGCGT CGCCGAGGCA CTGGCGATGA TGAATGCGCT GTTGGGGAAG
GAAACGCCCG GCTGGATCGG CGTGCAGTCG CTGCCGGTCA CCCAGTCGAA TGTGCTGGAA
TCCTACAAGA CCGTCTTCAA GAAGGAACCG CCGCCCGAGC TGGTGGACGC TTGCAACAAG
GCAAAGCCGG CCTGCAACTG A
|
|---|
| Protein sequence | MEETMTPILR QALPLTVLMA AAVSAISPAR ADVPATCVKG VDLAKLGPKS IVGQGPHGEK
AASPEVLALS EADAAKIKEK HFKVGISMQT VNLDWSQLQI QGITDTLKKY GVTVTGVASA
EYQVDKQIAD IENTIQQHPD GIISIPVDFT ATAPTYKKIA KAGIKLVLMD SIPTGLKHPE
EYVTMVSADS QGNGQIAAQI LASCVPQGAT IGLVNFGVDY FSTNERTKGV REWMKANRPD
IKMKQVDFTD PPKVSQIAGD FLTGNPDVKG LYAVWDQPAL DTLSSMRAQG IDIPMTTVDL
GLQSAIEIAK GGPLKATGSQ RPYDQGVAEA LAMMNALLGK ETPGWIGVQS LPVTQSNVLE
SYKTVFKKEP PPELVDACNK AKPACN
|
|---|
| |