| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7825 |
|---|
| Symbol | |
|---|
| ID | 5150708 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 8208169 |
|---|
| End bp | 8209101 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640562449 |
|---|
| Product | putative ribokinase |
|---|
| Protein accession | YP_001243556 |
|---|
| Protein GI | 148258971 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0524] Sugar kinases, ribokinase family |
|---|
| TIGRFAM ID | [TIGR02152] ribokinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGATCA TGAGCAAGAG TGGCGTCGCC GTTCTCGGCA TCTTCGTCGT CGATCTGGCC
TTCCGGGCCG GCAACATGCC TGCGATCGGC GAAACCATCG CAGGCTCGGG ATTTGCCATG
GGACCGGGCG GCAAGGGATC GAACCAGGCC GTCGCGGCCG CGCGCGCGGG CGCGGAGGTG
ACCTTCGTCT CGCGGATCGG CGCCGATGCC TTCGGTGAGC TTGCCGTCAA GACGTGGGAA
GCCGAGGGCA TTCGGCCGCG CGTGTCCAGG ACGGCGGACG CGCCGACGGG CGCCGCCTTC
ATCTATGTCC ACGAGACGCG CGGCGACAAC GCCATCATCG TGGTGAGCGG AGCGGCCGAT
GGTCTCGGCG CGGCGGATGT CGATGCCGCG GCGGAGGCGA TCCGCAGCAG CCGCGTGTTC
GTGACCCAGC TCGAACAGCC GGTCGCCGCA GCGCAGCGCG GGCTCGAGAT CGCGCGGGCT
GCGGGCAGCA TCACGGTGTT CAACCCGGCT CCGGCGACCG CGTTCGACGA CCGCCTGTTT
GCATTGTGTG ACTACGTTGT TCCCAACGAG ACCGAAGCCG AGGCGCTGAC GGGGATCGCG
GTGAGCGATC TTGCCGGCGC GCGCCGGGCG GGAGACGCGC TGCTGGCCAA GGGGGCCGGG
ACCGCGCTGA TCACCTTGGG TGAGCGTGGC GCACTGTTCC ATGGGCGAGA TCATTCGTTG
CACGTGCCGC CATTTGCCGC CGGTAAGGTG GTCGAGACGG CCGGTGCAGG CGATGCCTTC
GTCGGCGGCT TTGCGGCCGC GCTGGCGGGC GGCGCCGATC CGCTGGAGGC CGCGCGCTTC
GGTTCGGCGA CGGCCGGAAT TTCCGTGACG CGTGCCGGGA CTGCGCCTGC CATGCCGCGG
CGGGCGGAGA TCGAGGCCTT GTTGCAGAAG TGA
|
|---|
| Protein sequence | MTIMSKSGVA VLGIFVVDLA FRAGNMPAIG ETIAGSGFAM GPGGKGSNQA VAAARAGAEV
TFVSRIGADA FGELAVKTWE AEGIRPRVSR TADAPTGAAF IYVHETRGDN AIIVVSGAAD
GLGAADVDAA AEAIRSSRVF VTQLEQPVAA AQRGLEIARA AGSITVFNPA PATAFDDRLF
ALCDYVVPNE TEAEALTGIA VSDLAGARRA GDALLAKGAG TALITLGERG ALFHGRDHSL
HVPPFAAGKV VETAGAGDAF VGGFAAALAG GADPLEAARF GSATAGISVT RAGTAPAMPR
RAEIEALLQK
|
|---|
| |