| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7616 |
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| Symbol | |
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| ID | 5154559 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 8008884 |
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| End bp | 8010575 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640562260 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001243368 |
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| Protein GI | 148258783 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain
[COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.226909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.207076 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACACCCG AATTGCCACA GACCGCGACG ATCCTGTCGT CCCTCGGCCA AGCTGCCTTT
GTATGGGATC TGGCCAGCGA CGTGATCGTC TGGAGCGACC ATGTCGGCGC CGTGTTTCCG
GACGTGCCGC TGCCGCAGCT CTGCAACGGC ACCGAATTCG GCAAGCTCAT CGAGCCGGAG
CGTGGCGTCC GTTCCGAGGC CATGCGTCAG GTCGCGCCGC TGCACGGCGT CGACGGCACG
CCCTACCGCA TCGAATATGG CGTGCGGACC CACTCAGCGG CGCCGCTGAT CTGGGTCGAG
GAAACCGGGT GCTGGTTCGC TGGCCCCGAT GGCCGGCCTG CGCGCGCGCA AGGCATTGTC
AGGATCAACA ACGAGCGCCA TGCGCGTGAC GAGCAGCTGC TCAAATTGTC ACGCCATGAT
CCGCTGACCG GCGAGCTCAA CCGCACCCAT TTGCTGGCGA CGCTGGCGGA GGTGATCGAG
GAGTCGCAGC GGTTTCGCTT TGCCTGCGCC TTCATGCTGA TCGGGATCGA TCATCTCGCC
CGCATCAATG ACGCGTTCGG CTTCGACGTT GCCGACGGGG TGGTGCTCGA GGTCGCGCAG
CGCATCCGCG CCCGCTTGCG GGGCGGCGAT ACGCTCGGAC GGTTTTCGGG CAACAAATTC
GGGTTGATCC TGAAGAACTG CACGATGGAC GACATGACCG TCGCCGCCGA ACGCTTTCTC
GCGGCCGTGC GCGACGAGGT GGTGCCGACC AAATCGGGTC CGGTGGCGGT GACCGTGACG
ATCGGCGCGG TCAGTGTGCC GCGGCACGCA AGGTCGGTCG AAGAGGCGGT CAACCGCGCC
CATGAGACGC TGGATTCGGC CAAGCGGCGC CGCATCGGCT CGTTCTCGAC CTGGCGGCCG
AATGTCGAGC GCGACGCGCA GCGCAAGGTC AATATCCGGG TCACCGACGA GATCGTCACC
GCGCTGAACG AGCGGCGCAT CGTCACCGCG TTCGAGCCGG TGGTCCATGC CGACACGCGC
CAGACCGCCT TCTATGAGTG CCTGGTGCGC ATGCGTCAGG ACGATGGACG CGCCGTGCTG
GCGCCGGACA TCGTGCCCGT CGCCGAGCGA CTCGGCCTGA TTCGCCTGGT GGATCACAGG
ATCCTCGAGC TCGTCGTGGC CGAACTGGCC AGCGCGCCCG ACGTGACCCT GAGCCTGAAT
ATTTCCCCGG AAACGACGAT GGACCCGGAT TGGTGGGCCT CGATCGAATC GATGATGCGG
GCCCATCCCG GCGTCGCCGA AAGGCTCATT GTCGAGATCA CCGAGACGGT CGAAATTCAG
GATATCGACG ACCTCCGCGG CTTCGTGACG CGGCTGAAGG ACCTGGGCAG CCGGATCGCG
ATCGACGATT TCGGGGCCGG TCACACCTCG TTCCGGAATT TGCGCAAGCT CGGCGTCGAC
ATCGTCAAGA TCGATGGCGC GTTCGTCCAG AACCTGGCGC GCTCGGCCGA CGATCGCGCC
TTCGTGCAGA CCCTGGTCGA GCTGGCGCGG CGGCTGCAGA TCAAGACGGT GGCGGAATGG
GTCCAGGACG ACAGCTCGGT CACGCTGCTG CGCGACTGGG GCTGCGACTA CATCCAGGGC
CGATTGATTG GGCTTGCCTC GATCGAGAAG CCGTGGGTCG CGAGCAGGGC TGTGCTGCCT
GCGGCGAGCT GA
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| Protein sequence | MTPELPQTAT ILSSLGQAAF VWDLASDVIV WSDHVGAVFP DVPLPQLCNG TEFGKLIEPE
RGVRSEAMRQ VAPLHGVDGT PYRIEYGVRT HSAAPLIWVE ETGCWFAGPD GRPARAQGIV
RINNERHARD EQLLKLSRHD PLTGELNRTH LLATLAEVIE ESQRFRFACA FMLIGIDHLA
RINDAFGFDV ADGVVLEVAQ RIRARLRGGD TLGRFSGNKF GLILKNCTMD DMTVAAERFL
AAVRDEVVPT KSGPVAVTVT IGAVSVPRHA RSVEEAVNRA HETLDSAKRR RIGSFSTWRP
NVERDAQRKV NIRVTDEIVT ALNERRIVTA FEPVVHADTR QTAFYECLVR MRQDDGRAVL
APDIVPVAER LGLIRLVDHR ILELVVAELA SAPDVTLSLN ISPETTMDPD WWASIESMMR
AHPGVAERLI VEITETVEIQ DIDDLRGFVT RLKDLGSRIA IDDFGAGHTS FRNLRKLGVD
IVKIDGAFVQ NLARSADDRA FVQTLVELAR RLQIKTVAEW VQDDSSVTLL RDWGCDYIQG
RLIGLASIEK PWVASRAVLP AAS
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