| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7137 |
|---|
| Symbol | |
|---|
| ID | 5154060 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 7481962 |
|---|
| End bp | 7482882 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640561814 |
|---|
| Product | DNA-binding transcriptional activator GcvA |
|---|
| Protein accession | YP_001242925 |
|---|
| Protein GI | 148258340 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.126779 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGGC TACCCTCTCT GAACGGATTG CGGGCGTTCG AGGCCGCGGC GCGGCATCTC
AGCTTCACCC GCGCCGCTTC CGAATTGAAC GTGACGCAGA CCGCGATCAG CCACCAGATC
AAGCGGTTGG AGGACGAACT CGGCATTCGG CTGTTCGTGC GGCAGAACCG CAGCCTCGCG
CTGACGCCGC AGGCCCGCGA TTATCTGCCG CTGGTGCGCG CCGCCTTCGA CGATCTCAGG
CTGGCGACCG AGCGGCTGGT GCGCAAGGAC AATGGAAAGG TGCTGACGGT CTCCACCATC
GCCTCGCTGG CGGCCAAATG GCTGCTGCCA CGGCTGATCG CGTTCCAGGA GGCTCATCCC
GGTATCGACG TGCGCATCAC GACGTCCACC AGCCTGGTCG ATTTCCGCAC GGACGATGTC
GACGCCGCGA TCCGCTACGG CCGCGGCCAT TGGCCTGGCG CCCGCGCCGA ATGGCTGATG
GCCGACGAAC TGTTTCCGGT CTGCAGCCCG GCCCTGCTGC AGGGCGACAA GCCGCTGCGC
TGCCCGGAGG ACCTTGCCCA CCATACGTTG CTGCAAGCGA GCGGCGGCTA TGACGACGAC
TGGCGGTTGT GGCTGACGGC AGCGGGCCTG CCGGTAGAAA TCTCGCGGCA GAGCAGCCTC
AGCTTCGATC TGCTGTTCAT GACCGTTCAG GCCGCGATTG ACGGGCTCGG CGTCGCCATC
GGCCGCACCG CCTATGTCCA GGACGACATC GCCAAAGGCC GCCTCGTCGT CCCGTTCAAA
ATGGCGCTGC CGAGCGACGC CGGGTTCTAT CTGGTGACGC CGGAGGGCCG CACCGACGCG
CCGAAGCTCA CGGCCTTCCG GCAATGGCTC AAGAGTGCAG CGCAGCAAAC CCGTGAAGCC
CGAAATCCTG TTCAGCGTTA G
|
|---|
| Protein sequence | MPRLPSLNGL RAFEAAARHL SFTRAASELN VTQTAISHQI KRLEDELGIR LFVRQNRSLA
LTPQARDYLP LVRAAFDDLR LATERLVRKD NGKVLTVSTI ASLAAKWLLP RLIAFQEAHP
GIDVRITTST SLVDFRTDDV DAAIRYGRGH WPGARAEWLM ADELFPVCSP ALLQGDKPLR
CPEDLAHHTL LQASGGYDDD WRLWLTAAGL PVEISRQSSL SFDLLFMTVQ AAIDGLGVAI
GRTAYVQDDI AKGRLVVPFK MALPSDAGFY LVTPEGRTDA PKLTAFRQWL KSAAQQTREA
RNPVQR
|
|---|
| |