| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_7071 |
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| Symbol | |
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| ID | 5151882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7413314 |
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| End bp | 7414504 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640561749 |
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| Product | putative pimeloyl-CoA dehydrogenase pimC (large subunit) |
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| Protein accession | YP_001242860 |
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| Protein GI | 148258275 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | [TIGR03204] pimeloyl-CoA dehydrogenase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTTG CATTCACGAA GGAAGAGCAG GCGTTCCGCG AGGAAGTGCG GCAGTTCTTC
AGGGACAATG TCCCGCCGGA GACGCGCCGC AAGATGATCG AGGGCCGCCA TCTGTCGAAG
GACGAGATGG TGACCTGGTG GCGCATCCTC AACAAGAAGG GCTGGGGCGT CTCGCACTGG
CCGGAGGAAT ATGGCGGCAC CGGCTGGAGT TCGGTGCAGC ACTACATCTT CAACGAGGAG
CTGCAGGCCT ATCCTGCGCC GCAGCCGCTC GCGTTCGGCG TCAGCATGGT CGGCCCGGTG
ATCTACACCT TCGGCAATGA GGAGCAGAAG AAGAAGTACC TGCCGCGCAT CGCCAATGTC
GACGATTGGT GGTGCCAGGG CTTCTCGGAG CCGGGCTCGG GCTCCGACCT CGCTTCGCTG
AAGACCAAGG CCGAGCGCCG CGGCGACAAG TGGATCATCA ATGGCCAGAA GACCTGGACG
ACGCTCGCCC AGCACGCCGA CATGATCTTC TGCCTGTGCC GCACCGATCC CTCCGCCAAG
AAGCAGATGG GCATCTCCTT CATCGTCTTC AGCATGAAGT CGAAGGGCGT CACGGTGCGT
CCGATCCAGA CCATCGACGG CGGCCGCGAG GTCAACGAGG TGTTCTTCGA CGACGTCGAG
GTGCCCTACG AGAACCTGAT CGGCGAGGAG AACAAAGGCT GGGACTACGC CAAGTTCCTG
CTCGGCAATG AGCGCACCGG CATTGCCCGG GTCGGCGTCT CCAAGGAGCG CATCCGCCGC
ATCAAGGAGC TGGCGGCGAA GGTCGAATCC GGCGGTCGTC CGGTGCTGGA GGATCCGTCG
TTCCGCGAGA AGCTCACGGC CTGCGAGGTC GAGCTGAAGG CGCTCGAGCT GACGCAGCTG
CGCGTCGTCG CTGACGAGGG CAAGCACGGC AAGGGCAAGC CTAACCCGGC CTCCTCGGTG
CTGAAGATCA AGGGCTCCGA GATCCAGCAG ACCACGACCG AACTGCTGAT GGAGGTGATC
GGCCCGTTCG CCGCGCCCTA CGACGTCCAT GGCGACGACG ACAGCAACGA GACCATGGAT
TGGACCGCCC AGATCGCGCC GAGCTACTTC AACAACCGCA AGGTCTCGAT CTACGGCGGC
TCCAACGAGA TCCAGCGCAA CATCATCGCC AAGGCGGTGC TGGGGCTCTG A
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| Protein sequence | MDLAFTKEEQ AFREEVRQFF RDNVPPETRR KMIEGRHLSK DEMVTWWRIL NKKGWGVSHW
PEEYGGTGWS SVQHYIFNEE LQAYPAPQPL AFGVSMVGPV IYTFGNEEQK KKYLPRIANV
DDWWCQGFSE PGSGSDLASL KTKAERRGDK WIINGQKTWT TLAQHADMIF CLCRTDPSAK
KQMGISFIVF SMKSKGVTVR PIQTIDGGRE VNEVFFDDVE VPYENLIGEE NKGWDYAKFL
LGNERTGIAR VGVSKERIRR IKELAAKVES GGRPVLEDPS FREKLTACEV ELKALELTQL
RVVADEGKHG KGKPNPASSV LKIKGSEIQQ TTTELLMEVI GPFAAPYDVH GDDDSNETMD
WTAQIAPSYF NNRKVSIYGG SNEIQRNIIA KAVLGL
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