| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6897 |
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| Symbol | |
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| ID | 5151176 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | - |
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| Start bp | 7222645 |
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| End bp | 7223910 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640561579 |
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| Product | RNA polymerase ECF-type sigma factor |
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| Protein accession | YP_001242690 |
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| Protein GI | 148258105 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.0831712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACG GGGCCTGGAT TGATGCAACG CTGACATCAG CACGTCCCCA GGCCGTCGGC
GCGCTGCTGC GCTATTTCCG TGACCTCGAC GCCGCCGAGG AGGCGTTCCA GAACGCCTGC
CTGCGCGCCC TGAAGAGCTG GCCGCAGAAC GGACCGCCGC GCGATCCCGC GGCGTGGCTG
ATCATGGTCG GGCGCAATGC CGGGATCGAC GATGTCCGGC GTGTCCGCCG CGAACAACCG
CTGCCGGATG ATGAGGCGAT CTCCGATCTC GACGATGCCG AGAGCGCGCT CGCCGACCGG
CTCGACGGCT CGCACTACCG CGACGACATC CTGCGGCTGC TGTTCATCTG CTGCCACAAG
GAGCTGCCGG CAACGCAGCA GATCGCGCTG GCGCTGCGCG TGGTGTCCGG GCTGACGGTG
AAGCAGATCG CCCGTGCCTT CCTGGTCAGC GAGGCCGCGA TGGAGCAGCG CATCACCCGT
GCCAAGGCGC GCGTCGCGCA AGCGGACGTG CCGTTCGAGA CGCCGGGCGC GGTGGAGCGC
GCAGAGCGGC TGGTGGCGGT CGCTGCCATG ATCTACCTCA TTTTCAACGA GGGCTATTCG
GCCAGCGGCG AGGCCGCCGA GCTGCGCCAG CCGCTGTCCG AGGAGGCGAT CCGGCTGGCG
CGGCTGCTGC TGCGGCTGTT TCCGGGCGAG CCGGAGATCA TGGGCCTCAT GGCGCTGCTG
CTGTTGCAGC ATGCGCGTAG CGCCGCCCGC TTCGATGCCG AGGGCTTGCC GATCCTTCTG
GAGGACCAGG ACCGCACGCT GTGGAATCAG CCGATGATCG CCGAAGGCCT GGCGTTGATC
GACAAGGCGA TACGGCATCG CCGCAGTGGC CCCTACCAGA TCCAGGCGGC GATCGCGGCC
CTGCATGCGC GTGCCATCAG GCCGGAGGAC ACCGACTGGA CGCAGATCGA CCTGCTCTAT
GGCGCGCTGG AAGTGGTGCA GCCGTCGCCG GTCGTGACGC TCAATCGCGC CGTGGCGGTG
TCGAAGGTGC GCGGCGCCCA GGCGGCGCTC GATCTGATCG CGCCACTCGA GACCCGACTT
GCCAACTATT TTTACTTTTT CGGTGTGCGT GGCGCGCTGC TGATGCAGCT CGGACGCAAT
GACGAAGCGC GCACCGCCTT CGATCGCGCC ATCGCGCTGG CGCACAGCTC GGCCGAGGCC
GCTCATATCC GCATGCAGCT CGACCGTCTG ATGCGTGACA GCGCCACGGC GCGTCCGGGG
CGATGA
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| Protein sequence | MTDGAWIDAT LTSARPQAVG ALLRYFRDLD AAEEAFQNAC LRALKSWPQN GPPRDPAAWL
IMVGRNAGID DVRRVRREQP LPDDEAISDL DDAESALADR LDGSHYRDDI LRLLFICCHK
ELPATQQIAL ALRVVSGLTV KQIARAFLVS EAAMEQRITR AKARVAQADV PFETPGAVER
AERLVAVAAM IYLIFNEGYS ASGEAAELRQ PLSEEAIRLA RLLLRLFPGE PEIMGLMALL
LLQHARSAAR FDAEGLPILL EDQDRTLWNQ PMIAEGLALI DKAIRHRRSG PYQIQAAIAA
LHARAIRPED TDWTQIDLLY GALEVVQPSP VVTLNRAVAV SKVRGAQAAL DLIAPLETRL
ANYFYFFGVR GALLMQLGRN DEARTAFDRA IALAHSSAEA AHIRMQLDRL MRDSATARPG
R
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