Gene BBta_6879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6879 
Symbol 
ID5151348 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp7205602 
End bp7206324 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content64% 
IMG OID640561561 
Producthypothetical protein 
Protein accessionYP_001242672 
Protein GI148258087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0994967 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0312743 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGCTG CGGACGCGAA TAGCGCAGCG AGCATGCGAG GTTTGGACCT GCTCGACCGT 
GTCGATTATC GACTGGCGCG GACGGCGGAG GAGAAAGACG AGATCTATCG TCTGCGCTAC
AGGGCCTATC TGCGGGAAGG GGCCGTCTCA CCCGCTCCAG ACGAGCGCGT CTTCGATCAT
TATGACGATC TGCCGAACTG CTGGATCTTC GGGGTCTATG TGGACGGGCA TTTGTGCAGC
TCGATCCGCA TCCACATCGC CACGCCCGCC TGGCGCAAGT CGCCCTCGGT CGACGTGTTC
GGCGACGTTC TCCATCCCAA GCTGGATGAG GGGCTGGTTT TCGTCGACTC GACGCGGTTC
GTGGCGGACC CCGACAAAGC GAGGTCCTGG ACGGCTCTGC CTTACGTGAC GGTGCGCCTC
GGGTCGATGG CCGGCGTGCA TTTCGATGCC GACTATGGCC TCGCCATGGT GCGTCCCGAG
CACCAGGCCT TCTATCATCG CGTTTTCCTG CATGAGACGT GGGGCCCGCC GCGCCTGTTC
CCGGGCCTCG TGAAGCCGGT CGGACTGATG GCGTCGCATC TGCCGAGCGT GCGTGACAGG
GTTCTGGCGC GCTATCCGTT CCTGCACTCG ACCGTGTTCG AACGGCGCAT GCTGTTCGAT
CGCGCGACGC CCGACGCCTT CACTGATTCG TTCAGGATTC AGGCGGTCGC CAAAGCCGGT
TGA
 
Protein sequence
MGAADANSAA SMRGLDLLDR VDYRLARTAE EKDEIYRLRY RAYLREGAVS PAPDERVFDH 
YDDLPNCWIF GVYVDGHLCS SIRIHIATPA WRKSPSVDVF GDVLHPKLDE GLVFVDSTRF
VADPDKARSW TALPYVTVRL GSMAGVHFDA DYGLAMVRPE HQAFYHRVFL HETWGPPRLF
PGLVKPVGLM ASHLPSVRDR VLARYPFLHS TVFERRMLFD RATPDAFTDS FRIQAVAKAG