Gene BBta_6688 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6688 
Symbol 
ID5154350 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6963961 
End bp6964848 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content69% 
IMG OID640561377 
Producthypothetical protein 
Protein accessionYP_001242491 
Protein GI148257906 
COG category[R] General function prediction only 
COG ID[COG1512] Beta-propeller domains of methanol dehydrogenase type 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0102145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGTCGGCCG TCAAGGCGCT GCTGGCGACG CTGCTGGTCT GCCTCGCGAC GATGGTGCTG 
GCCGACGTCG CGGTGCCGCA GCTGACCGGC CGCGTCGTCG ACCAGACCGG CACGCTGTCG
TCGTCGGACA TCGCGGGCCT GACGCAGAAG CTGAAGGATC TGGAGACGCG CAAGGGCAGC
CAGGTCGCGG TGCTGATCGT GCCGACGACG CAGCCGGAGA CGATCGAGCA GTTCTCGATC
CGCGTCGCCG AGACCTGGAA GATCGGCCGC AAGAAGGTCG ATGACGGCGC GCTGCTGGTG
ATCGCCAAGA CCGACCGCAA GCTGCGCATC GAGGTCGGCT ACGGTCTTGA GGGCAGCCTG
ACCGACGTCA CCGCGCGACG CATCATCGAC GAGGTGATCA CGCCGAAATT CCGCCAGGGC
GATTTCGCGG GCGGCATTGA CGCCGGCGTC GATCGCATCA TCGGCGTGAT CAATGGCGAG
ACCTTGCCGG TGCCGCAGCC GCAGGCGTCG CATGGCACGG ATCTCGACTT CGACTCCCTC
ACATCGTTCG CGCCGGTGGC GCTGTTCGGC GCGCTGGTGA TCGGCGGCAT CCTGCGGACC
CTGCTTGGCC GCCTGATCGG ATCGCTTGCG ACCGGCGGCG CCATGGGCGT GATCGCCTGG
CTGCTGGTGG GATCGGCCGG GCTGGCGGCG CTGTCGGCCA TTGCCGGCTT CGTCATCGCC
TTCATTGCCG ACAGTTTTGC CGGGATGAAT ACGCCGGGCA GCCCCCGTCG CGGCGGCTGG
ACGAGCGGCT CGTCGGGGGG CTGGAGCAGC GGCAGCTCCA GCGACAGCGG CAGCTTCTCC
GGCGGCGGCG GCAGTTTCGG CGGCGGCGGC GCCTCGGGCA GCTGGTGA
 
Protein sequence
MSAVKALLAT LLVCLATMVL ADVAVPQLTG RVVDQTGTLS SSDIAGLTQK LKDLETRKGS 
QVAVLIVPTT QPETIEQFSI RVAETWKIGR KKVDDGALLV IAKTDRKLRI EVGYGLEGSL
TDVTARRIID EVITPKFRQG DFAGGIDAGV DRIIGVINGE TLPVPQPQAS HGTDLDFDSL
TSFAPVALFG ALVIGGILRT LLGRLIGSLA TGGAMGVIAW LLVGSAGLAA LSAIAGFVIA
FIADSFAGMN TPGSPRRGGW TSGSSGGWSS GSSSDSGSFS GGGGSFGGGG ASGSW