Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6584 |
Symbol | |
ID | 5155734 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6863236 |
End bp | 6863793 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640561280 |
Product | putative bacteriophage protein, GP46-like protein |
Protein accession | YP_001242394 |
Protein GI | 148257809 |
COG category | [S] Function unknown |
COG ID | [COG4381] Mu-like prophage protein gp46 |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAACG ACGTTGTGAT CCGCGCCGCC GAGGGGTGCG CGGCGGAAAC AAGCGTGCTT TGGGACTCGG TTTGGGACAC GGTTGGCGGC GTCGCCGATT GGGCGATGGC CGGCGCCGAC GAGCCGAACA ATCGCGGCGG CTTGCGATCG AAAGCGGCGA TCGAAACCGC CGTGATCTTG TGTCTGTTTT CCGACAAATG GATCGACAAG GAAAGCCCGT TCTTCTTCCT TGCCGATGGC GATCAACGCG GATGGTGGGG CGACGGTGTT GACGTGCGCG CCGATCTCAA CGAGGGGCCG CTCGGTTCAT GGCTGTATTT GCTGGAGCGC GCGCCGCTCG AAATCCTCGG CATGCCCGCC TCGCATTGGG CCGAGCAATG GGCGCTTGAA GCGCTGGCAA CTCTGAAAAC GCAAGGCGTG TGTGTGCGCA TCGAAGTCTC GGCCACGCAA TACGAGCTTG AAAGCCGGAT TGAGCTAACC GTCGCGCTGT ATGGCCGCGA CGGTTCGCTC GTCTACAACC GAAATTTTGA CGTGCTTTGG AATCAGGTGG CGCGCTGA
|
Protein sequence | MANDVVIRAA EGCAAETSVL WDSVWDTVGG VADWAMAGAD EPNNRGGLRS KAAIETAVIL CLFSDKWIDK ESPFFFLADG DQRGWWGDGV DVRADLNEGP LGSWLYLLER APLEILGMPA SHWAEQWALE ALATLKTQGV CVRIEVSATQ YELESRIELT VALYGRDGSL VYNRNFDVLW NQVAR
|
| |