| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6540 |
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| Symbol | |
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| ID | 5153117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6823869 |
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| End bp | 6824870 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640561239 |
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| Product | SDR family dehydrogenase/reductase |
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| Protein accession | YP_001242354 |
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| Protein GI | 148257769 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.08762 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.316669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCGCC GCAGCATGTT GCAGAGCCTG GGTTCGGGGG CGGTGACGAT TCCGCTGGCG
CAGCTGCTTC CGGGAAGCGC CGAGGCGGCG GAGTCCGCAG GCCCGGCCAA TCTGGCGATC
AGCCCGATCG ATCCGGACTA CTTCATCAAG GATCGCTTCA AGTCACGCAC GATCGCCATC
ACCGGATTCG CCCGCGGCAT GGGCCGCGCC GCGGCGCTAC GGGCGGCGCG CGAGGGGGCG
AACATCGTCG GGATCGACTG GCTGCCGGAC CTGGCGCGCG AGACGGCGGC CGCGATCCAG
CGCGAGGGCG GCGCCATCGA ATTTCTCGTC GGCGATGTCG CCAAGGGCGA TTCCTGCGAC
CTGATGGTCA AGCGGGCGGT CGAAAAATTC GGCGGGCTGG ATTTCGCCAT CAACAATGCC
GGCGTCATGG ACGGCGTGTT TTCCGGCGAG GCGTTCGACT ATGACAAGCA GAAGGACCTG
CTGTTCGCGC CGCTCCACGA GGCCTCCGAT GCCTATTGGG ACAATGTCCT GGCCACCAAC
GCCACCGGCG TGTTCCGCGC CATGCGGGCC GAGCTGCGGC AGATGGTGGC GCAGAAGCGC
GGCGGGGCCA TCGTCAACGT CGCCTCGATC GCCGGCCTGA CCGGACTGGC CGGCAATCCG
GCCTATGTCG CCAGCAAGCA CGCGGTCAAC GGATTGACCG CCAACGCCGC GGTCGACTAC
GCGCCGCACG GCATTCGCAT CAACTCCGTC AACATGGCGG CGACGGACAC GCCGATGATC
GCGCGGGCGG CGCAGGCCGT CGCCGCGAAG GCGCAGCGGG CGCCGGCCGA CGGCGGCATG
GGACGGCTGA AGACGAACTC CATTCTCAGT TATGCGGATC CCAAACATCG CCCGGCCACC
GTGTGGGAGC AGGTCGCGGT GATGCTGTTC CTGCTGTCGC CCGAGGCGTC GAACCTGACC
GGCGCGTTCT ACGCGACGGA CGGCGGATGG ACGGCCTATT GA
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| Protein sequence | MDRRSMLQSL GSGAVTIPLA QLLPGSAEAA ESAGPANLAI SPIDPDYFIK DRFKSRTIAI
TGFARGMGRA AALRAAREGA NIVGIDWLPD LARETAAAIQ REGGAIEFLV GDVAKGDSCD
LMVKRAVEKF GGLDFAINNA GVMDGVFSGE AFDYDKQKDL LFAPLHEASD AYWDNVLATN
ATGVFRAMRA ELRQMVAQKR GGAIVNVASI AGLTGLAGNP AYVASKHAVN GLTANAAVDY
APHGIRINSV NMAATDTPMI ARAAQAVAAK AQRAPADGGM GRLKTNSILS YADPKHRPAT
VWEQVAVMLF LLSPEASNLT GAFYATDGGW TAY
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