12 homologs were found in PanDaTox collection
for query gene BBta_6528 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009485  BBta_6528  hypothetical protein  100 
 
 
66 aa  131  3e-30  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.299338  normal 
 
 
-
 
NC_007925  RPC_4226  hypothetical protein  80.3 
 
 
83 aa  111  3e-24  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.975431  normal 
 
 
-
 
NC_007406  Nwi_0528  hypothetical protein  80.3 
 
 
66 aa  111  4.0000000000000004e-24  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.154267  normal  0.951563 
 
 
-
 
NC_011004  Rpal_1827  putative exported protein of unknown function  78.79 
 
 
66 aa  108  2.0000000000000002e-23  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.117921  n/a   
 
 
-
 
NC_007964  Nham_3368  hypothetical protein  80.3 
 
 
66 aa  106  9.000000000000001e-23  Nitrobacter hamburgensis X14  Bacteria  normal  n/a   
 
 
-
 
NC_007958  RPD_2888  hypothetical protein  71.21 
 
 
64 aa  90.5  6e-18  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.452348  normal  0.167276 
 
 
-
 
NC_007778  RPB_3907  hypothetical protein  77.61 
 
 
67 aa  82.8  0.000000000000001  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0214164  normal 
 
 
-
 
NC_007958  RPD_3667  hypothetical protein  72.73 
 
 
66 aa  82  0.000000000000003  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal 
 
 
-
 
NC_011004  Rpal_3301  hypothetical protein  65.15 
 
 
64 aa  77.4  0.00000000000006  Rhodopseudomonas palustris TIE-1  Bacteria  normal  n/a   
 
 
-
 
NC_007964  Nham_2222  hypothetical protein  57.58 
 
 
64 aa  71.6  0.000000000003  Nitrobacter hamburgensis X14  Bacteria  normal  0.0522643  n/a   
 
 
-
 
NC_007406  Nwi_1889  hypothetical protein  54.55 
 
 
107 aa  69.3  0.00000000002  Nitrobacter winogradskyi Nb-255  Bacteria  normal  0.352994  normal 
 
 
-
 
NC_007778  RPB_2571  hypothetical protein  71.21 
 
 
64 aa  66.2  0.0000000002  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0739572  normal  0.111089 
 
 
-
 
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