18 homologs were found in PanDaTox collection
for query gene BBta_6411 on replicon NC_009485
Organism: Bradyrhizobium sp. BTAi1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_009485  BBta_6411  reaction center protein H chain (photosynthetic reaction center H subunit)  100 
 
 		 260 aa  533  1e-150  Bradyrhizobium sp. BTAi1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007925  RPC_1319  photosynthetic reaction center subunit H  60.78 
 
 		 255 aa  304  1.0000000000000001e-81  Rhodopseudomonas palustris BisB18  Bacteria  normal  0.474837  normal  0.244306 
 
 
-
 
NC_007958  RPD_3730  photosynthetic reaction center subunit H  58.66 
 
 		 254 aa  294  8e-79  Rhodopseudomonas palustris BisB5  Bacteria  normal  0.0219155  hitchhiker  0.00401595 
 
 
-
 
NC_007778  RPB_3975  photosynthetic reaction centre, H-chain  55.91 
 
 		 254 aa  283  2.0000000000000002e-75  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.0176232  normal  0.276586 
 
 
-
 
NC_011004  Rpal_1736  photosynthetic reaction center H subunit  57.09 
 
 		 255 aa  263  2e-69  Rhodopseudomonas palustris TIE-1  Bacteria  normal  1  n/a   
 
 
-
 
NC_011666  Msil_2036  photosynthetic reaction center H subunit  56.42 
 
 		 253 aa  248  9e-65  Methylocella silvestris BL2  Bacteria  n/a    normal  1 
 
 
-
 
NC_007643  Rru_A0617  photosynthetic reaction center, H-chain  46.8 
 
 		 257 aa  226  2e-58  Rhodospirillum rubrum ATCC 11170  Bacteria  normal  0.110547  n/a   
 
 
-
 
NC_010725  Mpop_5355  photosynthetic reaction center H subunit  46.33 
 
 		 257 aa  224  9e-58  Methylobacterium populi BJ001  Bacteria  normal  0.356568  normal  1 
 
 
-
 
NC_008789  Hhal_1631  photosynthetic reaction center subunit H  45.99 
 
 		 278 aa  224  1e-57  Halorhodospira halophila SL1  Bacteria  normal  0.768314  n/a   
 
 
-
 
NC_010172  Mext_4810  photosynthetic reaction center subunit H  46.33 
 
 		 257 aa  223  2e-57  Methylobacterium extorquens PA1  Bacteria  normal  0.54526  normal  0.0831803 
 
 
-
 
NC_011757  Mchl_5277  photosynthetic reaction center H subunit  45.95 
 
 		 257 aa  223  3e-57  Methylobacterium chloromethanicum CM4  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010511  M446_3724  photosynthetic reaction center subunit H  45.69 
 
 		 261 aa  217  1e-55  Methylobacterium sp. 4-46  Bacteria  normal  1  normal  0.055841 
 
 
-
 
NC_010505  Mrad2831_1842  photosynthetic reaction center subunit H  46.74 
 
 		 259 aa  215  7e-55  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  1  normal  0.0733944 
 
 
-
 
NC_009952  Dshi_3540  reaction center protein H chain  44.27 
 
 		 256 aa  186  2e-46  Dinoroseobacter shibae DFL 12  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009428  Rsph17025_1004  photosynthetic reaction center subunit H  42.35 
 
 		 260 aa  185  5e-46  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  1  normal  0.61506 
 
 
-
 
NC_009049  Rsph17029_1934  photosynthetic reaction center subunit H  42.75 
 
 		 260 aa  181  1e-44  Rhodobacter sphaeroides ATCC 17029  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007493  RSP_0291  reaction centre H protein  42.75 
 
 		 260 aa  181  1e-44  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.152025  n/a   
 
 
-
 
NC_007802  Jann_0155  photosynthetic reaction center subunit H  40.52 
 
 		 260 aa  171  7.999999999999999e-42  Jannaschia sp. CCS1  Bacteria  normal  1  normal  1 
 
 
-
 
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