| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6372 |
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| Symbol | |
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| ID | 5154218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6633864 |
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| End bp | 6636812 |
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| Gene Length | 2949 bp |
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| Protein Length | 982 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640561077 |
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| Product | conjugal transfer relaxase TraA |
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| Protein accession | YP_001242193 |
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| Protein GI | 148257608 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR02768] Ti-type conjugative transfer relaxase TraA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.10395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGATCT ATCATCTTCA CGTCAAGGTC ATTGGCCGCA AGTCTGGCTC CAGCGCGGTG
GCGTCGGCCG CCTACCGCTC GGGCTCGCGG CTGCGCGACG AGCGGCTTGA CCGCAGCCAC
GATTTTTCCG GCAAGCGCGG CGTCGCTCAT TCCGAGGTGA TGCTGCCTGA ACATGCGCCG
GAAGCGTGGA GCGACCGTGA ACGGCTCTGG AACGATGTCG AGGCGTTCGA GGTTCGCAAG
GACGCCCAGC TTGCCCGTGA GGTCGAATTC GCCATCCCGC GCGAGATGAC GCAAGCTCAA
GGCATCGAAC TGGCCCGCGA CTTCGCGCAG GCGGAGTTTG TAAGTTTGGG CATGATTGCC
GATCTCAATG TGCATTGGGA CATCGGCGAA GACGGTCTGG CCAAACCCCA TGCCCACGTC
ATGCTGACCA TGCGCGCGAT GGACGAGAAT GGCTTTGGTC CCAAGGTCCG GGACTGGAAC
CGCACGGAGA TGATCGAGCG TTGGCGCGAA CGCTGGGCGG GGCTTGCCAA TGAGCGGCTG
GCGGAACTCG ACATCGACGC GCGGATCGAC CATCGCAGCT TCGAGGCGCA GGGGATCGCG
CTGGAGCCGC AAAGCCAGAT CGGCGCACCC GCGCAACGGA TCGAGCGCGA AGGAAACGAG
GCCGACCGCG CCGAGATGCA CCGCGAGATC GCGCGCGGCA ATGGCGCGCG GATCATCGCC
GATCCTTCCC TCGGGCTGGA CGCGATCACG CGACAGCAAT CGACCTTCAC GCAGCGAGAC
ATAGCGAAGT TCGCCCACCG TCACAGCGAC GGTCTCGACC AGTTCAATGA GGTCATGGGC
GCGATGCGTA GCGCTCCAGA TCTTGTCGAA CTCGGCAATG ACGCTCGCGG CGAGGATCGG
TTCACCACCC GCGAGATGAT CGAGGCTGAA CAGCGCCTGC ACCGCGCCGC CGAACTCATG
GCGGAACGGG AGCGCCATGA GTTGCGTGAC ACGGATCGCG AAGCGGCTTT GGCGCGTGCG
GAAGCGCGCG GCCTTGTCCT TTCGAGCGAG CAAGCTGATG CGCTGTCGCA TGTCACGGAT
GGGCGCGATT TGGGCGTCGT GGTCGGCCAT GCCGGAACGG GAAAGAGCGC GATGCTGGGC
GTGGCGCGGG AGGCATGGGA AGCAGCGGGC TACGAGGTCC GGGGCGTAAC ACTGTCTGGC
ATTGCGGCGG AAAACCTCGA AGGCGGATCG GGAATCTCGT CACGCACCAT TGCGAGCATG
GAACATGGCT GGGGACAGGG CCGCGACCTG CTCACGATCC GCGACGTGCT TGTCATCGAC
GAGGCGGGCA TGGTCGGCAC ACGGCAGTTG GAACGCGTAC TGTCCCATGC TGCCGACGCC
GGCGCCAAGG TCGTGCTGGT CGGCGATCCG CAACAGCTGC AAGCAATAGA AGCGGGAGCG
GCCTTCCGCT CGATCCATGA ACGCCATGGC GGTGCCGAGA TCGGCGAGGT GCGCCGTCAG
CGCCAGGACT GGCAGCAGGA CGCCACCCGT GATCTCGCCA ACGGCAAAAC CGGCCATGCG
CTGGAGGCCT ATCGCTCTCA CGGCATGGTG CATGAGGCCC AAACACGCGA GCAGGCGCGC
GACGATCTGA TCGACCGCTG GGACCGCGAC CGGCAGGCAT CGCCGGACCG TGCCTGCATC
ATCCTCACCC ATACCAATGA CGAGGTGCGC GCGCTCAACG AGGCTGCGCG GACGCGGATG
CGTGCCGCCG GTGATCTCGG CAATGAGGTG CGTTTGACCG TCGAGCGCGG CGACCGCGGC
TTCGCCAGCG GGGATCGCGT CATGTTCCTG CAAAACGAAC GTGGCCTCGG CGTGAAGAAC
GGCACCCTCG GCACCATCGA ACAGGTGAGC GCGCAGTCCA TCACCGTTCA GACCGACGAT
GGCCGATCCG TGCACTTTGA TCTCAAAGAT TTCAACCGCA TCGACCATGG CTATGCGGCG
ACCATCCACA AGGCGCAGGG CATGACGGTG GACCGCATCC ATGTGCTGGC GACACCGGGC
ATGGATGCCC ATAGCAGCTA TGTCGCCCTG TCACGACACC GCGACGGCGT GGAGCTGCAT
TATGGCCGCG ACGATTTTGC CAATCGGGAC CGGCTCACCC GCACCCTGTC GCGCGACCGG
TCGAAGGACA TGGCTTTGGA TTACGAGCAG CGCGATCCGG TCCAGAGCTA TGCCGAGCGG
CGCGGCATCA CCTTCGGCGA GCGCGTTGCC GAAATTGTCA AGAAGATCGT GCCGGAGAAA
GTGCGCAACA TGTTCGACGG CCTGCGGCCG TCTCCCCACG CCGTCCCTGG CCCGGACGGC
ACGCGGAGGC TGGAACTGGA AGCGTCGGAA AAGAAGTCGG TGGAAGACCT GGAAGCGGCG
CTGCGCAAGG CCCGCACCAA GGCGCTGCTC CGCCATGCCC AAGCCGTGGA TGCGATCTTC
GATATCCATG AGCGGGGCGG CAAGGCCAGC CCGACACAGG TGAAGGAATT GCAGGAGGCC
CGCAAGGTCT TCGAGGGGGT GCGGCCCTAT GGCTCGCACG ACGCCGAAGC CGCCTACAAG
AAGAATCCGG AACTCGCCCG CGAGGCGGCT GGCGGCCAGG TCAACCGCGC CATCCGCGCG
CTCCAGCTCG AAACCGAGCT GCGGACCGAT CCGAGCCGCC GCGCCGACCG TTTCGTGGAA
CGCTGGCAGA AGCTCGACCA CACCAGCCAG CGTCAATATC AGGCTGGCGA CATGTCCGGC
TACAACGCGA CGCGCTCGAC GATGGGCGAC ATGGCCAAAA GCCTCGAACG CGATCCGCAA
ATGGAATCCA TCCTCGCCAA CCGCAAGAAA GACCTCGGCA TCGCGTTCGA ATCAGGCCGC
CGGCTCGGCC AGGAGTTGGC CTTTACCCAC GGCATCGACC TTGGCCGCGG CCGAGGCATC
GGAATTTGA
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| Protein sequence | MAIYHLHVKV IGRKSGSSAV ASAAYRSGSR LRDERLDRSH DFSGKRGVAH SEVMLPEHAP
EAWSDRERLW NDVEAFEVRK DAQLAREVEF AIPREMTQAQ GIELARDFAQ AEFVSLGMIA
DLNVHWDIGE DGLAKPHAHV MLTMRAMDEN GFGPKVRDWN RTEMIERWRE RWAGLANERL
AELDIDARID HRSFEAQGIA LEPQSQIGAP AQRIEREGNE ADRAEMHREI ARGNGARIIA
DPSLGLDAIT RQQSTFTQRD IAKFAHRHSD GLDQFNEVMG AMRSAPDLVE LGNDARGEDR
FTTREMIEAE QRLHRAAELM AERERHELRD TDREAALARA EARGLVLSSE QADALSHVTD
GRDLGVVVGH AGTGKSAMLG VAREAWEAAG YEVRGVTLSG IAAENLEGGS GISSRTIASM
EHGWGQGRDL LTIRDVLVID EAGMVGTRQL ERVLSHAADA GAKVVLVGDP QQLQAIEAGA
AFRSIHERHG GAEIGEVRRQ RQDWQQDATR DLANGKTGHA LEAYRSHGMV HEAQTREQAR
DDLIDRWDRD RQASPDRACI ILTHTNDEVR ALNEAARTRM RAAGDLGNEV RLTVERGDRG
FASGDRVMFL QNERGLGVKN GTLGTIEQVS AQSITVQTDD GRSVHFDLKD FNRIDHGYAA
TIHKAQGMTV DRIHVLATPG MDAHSSYVAL SRHRDGVELH YGRDDFANRD RLTRTLSRDR
SKDMALDYEQ RDPVQSYAER RGITFGERVA EIVKKIVPEK VRNMFDGLRP SPHAVPGPDG
TRRLELEASE KKSVEDLEAA LRKARTKALL RHAQAVDAIF DIHERGGKAS PTQVKELQEA
RKVFEGVRPY GSHDAEAAYK KNPELAREAA GGQVNRAIRA LQLETELRTD PSRRADRFVE
RWQKLDHTSQ RQYQAGDMSG YNATRSTMGD MAKSLERDPQ MESILANRKK DLGIAFESGR
RLGQELAFTH GIDLGRGRGI GI
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