| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6315 |
|---|
| Symbol | |
|---|
| ID | 5152445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 6565872 |
|---|
| End bp | 6568718 |
|---|
| Gene Length | 2847 bp |
|---|
| Protein Length | 948 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640561022 |
|---|
| Product | bifunctional transaldolase/phosoglucose isomerase |
|---|
| Protein accession | YP_001242139 |
|---|
| Protein GI | 148257554 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0166] Glucose-6-phosphate isomerase
[COG0176] Transaldolase |
|---|
| TIGRFAM ID | [TIGR00876] transaldolase, mycobacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGG TCAAAGCTCT CGAACAACAC GGCCAGGCGG TCTGGCTCGA TTTCCTCGCG
CGCGGCTTTG TCGCCAAGGG CGACTTGAAG CGGCTGATCG ACGAGGACGG CGTCAAAGGC
GTCACCTCCA ACCCGGCGAT CTTCGAGAAG GCCATCGGCA GCTCGGACGA ATATGACGCC
CCCATTGCCA AAGCCTTGAA GGGCGGCGAC CGCTCCCCGA CGCAGCTGTT CGAAGCGGTC
GCGGTCGAGG ACATCCAGAA CGCCGCTGAC GTTCTCCGGC CAGTCTATGA CAGCTTCAAC
GGCAATGACG GCTTCGTGAG CCTCGAAGTA TCGCCCTATC TGGCGATGGA CGCCAAGGGG
ACGATCGCCG AAGCCGAGCA GCTGTGGAAG GCGGTCGACC GGCGGAACTT GATGATCAAG
GTGCCGGCGA CGGAGGCCTG CCTGCCGGCC ATCCAGCACC TGATCTCCCG GGGAATCAGC
GTCAACATCA CGCTATTGTT CGCGCAGGAG GTCTACCGGC AGGTCGCCGA GGCCTATCTC
GCCGGCCTTG AAGCGTATGT CGCCGATGGC GGCGATCCGT CGCATGTCGC TAGCGTGGCC
TCGTTCTTCG TCAGCCGCAT CGACAGCGTC GTCGACAAGC AGCTCGACGA GAAGATCGCG
CAGGCCAACG ATCCGACCGA GAAGGAGCGG CTGACCGCGC TCAAGGGCAA GATCGCCATC
GCCAACGCCA AGATGGCCTA CCAGGACTAC AAGCGCCTGT TCTCCGGTGC GCGCTGGGAG
CGGCTGGCGG CCAAGGGCGC CAAGCCGCAG CGGCTGCTCT GGGCCTCCAC CGGCACCAAG
AACAAGGACT ACAGCGACGT TCTCTATGTC GAGGAGTTGA TCGGTCCCAA CACCGTCAAC
ACCGTGCCGC CGGCGACCTT GGACGCCTTC CGCGACCACG GCAAGGTCCG CGACAGCCTC
GAAGAGGACG TCGAGGCGGC TCAGGCGGCG CTCGAAGCGC TGGCCAAGAC CGGCATCTCG
CTCGACGAGA TCACCGCGGA GCTGGTGATC GACGGCGTCA AGCAGTTCGC CGACGCCGCC
GACAAGCTCT ATGGCGCGGT CGCGCACAAG CGCGCAGTCG TGCTCGGCGA GCGACTTGGG
CAGCAGTCGA TCGCGGTTGC TGCTGATCTC GACAAGAAGG TCCAGGCCGC GACCGAGGAT
TGGCGCAAGA CCGCCAAGAT CCGCCGGCTC TGGCACAAGG ATTCCTCGGT CTGGACCGGC
AAGGACGAGC ACAAATGGCT GGGCTGGCTG ACCTGCGTCG AGAAAGCCGA CATCGCCGAC
TATGAAGATT ACGCCCAGCG CGTGAAGGGG CAGAAGTTCT CCGATGCCGT CGTGCTCGGC
ATGGGCGGCT CCAGCCTCGG GCCGGAGGTG CTCGCCAGGA CCTTCCCGCG CAAGGCCGGC
TTCCCCAGGC TGCACGTGCT CGACTCCACC GACCCGGCGC AGGTGCGCGC GATGGAAAAG
GCCATCGATA TTTCAAAGAC GGTGTTCATC GTCTCCTCGA AATCCGGCGG CACCACCGAG
CCGAATGCGA TGAAGGACTA TTTCTTCGCC CGCGTCAGCG AGGCGATCGG GGCAAACAAG
GCCGGTCATC GCTTCATTGC CGTCACCGAT CCCGGCTCAT CGCTGGAGAA GGCAGCCAAA
GCACAAGGCT TCGCGCGCGT CTTCCACGGC GAGCCCTCGA TCGGCGGCCG CTACTCGGTG
TTGTCGCCCT TCGGCCTGGT GCCGGCGGCC ACCGCCGGCA TCGACGTGCG CAAGCTGGTC
ACCAACGCGC AGGCGATGGT GCGCTCCTGC GGCCCCGACG TGCCGCCGCT GCAGAACCCC
GGGGTACAGC TCGGTCTGGC GATGGGTCTT GCCGGCCTGG ACGGCCGCGA CAAGGTGACG
ATCTTCGCCT CGCCGAGGAT CGCTGATTTC GGCGCCTGGG CAGAGCAGCT GATCGCGGAA
TCCACCGGCA AGGAAGGCAA GGGCCTGATC CCGATCGATG GCGAGCCCAT CGGCGATCCT
GCCGACTATG GCAGCGACCG CTTCTTCATC GACATCAGGG TCGAGGGCGA CGACATCCCC
GATCACGACG CGAAGCTCGC CGCGCTGGAA GACGCCGGTC ATCCGGTGGT CCGCATCGTC
ATCAGCTCGA TCGATCAGCT CGGGCAGGAG TTCTTCCGTT GGGAAATGGC GACCGCCGTC
GCCGGCGCCG CGCTCGGCAT CAACCCGTTC GACCAGCCGG ATGTCGAATC CGCCAAGATC
AAAACCCGCG AGCTGACGGC AGCGTTCGAG CAGACCGGCG CGCTTCCCGC CGAAGAGCCG
GTCATTTCGG TCAAGGGCTG CGAGCTCTAT ACGGACGCGC AGAATGCCGA GAGCCTGCGC
GAGCATGGCG CGGACGGAAC GCTCGCCTCC TGGCTGAAGG CCCATCTCGG CCGCGCAAGC
GACGGCGACT ACATCGCTCT GCTCGGCTAT ATCGAGCACA ATGGCGCCAA CACCGACGCC
CTGCAACGGA TCAGGCTCAA GCTGCGCGAC GCCAAACACC TCGCCACCTG CGCCGAGTTC
GGGCCACGCT TCCTGCACTC CACCGGGCAG GCCTATAAGG GCGGACCGGA CAGCGGCGTG
TTTCTGCAGA TCACCGCCGA TGATGCCCAG GATCTGCCGA TCCCTGGCCA GAAGGCGAGC
TTCGGCGTGA TCAAGGCAGC GCAAGCGCGC GGCGATTTCG ATGTCCTCAC CGAACGCGGC
CGGCGCGCAT TGCGGGTGCA CCTGAAGGGC AATCTCAAAT CGGGCCTGAA GATGCTCGAC
AGCGCCATCA CCGAAGCACT GAGCTAG
|
|---|
| Protein sequence | MNPVKALEQH GQAVWLDFLA RGFVAKGDLK RLIDEDGVKG VTSNPAIFEK AIGSSDEYDA
PIAKALKGGD RSPTQLFEAV AVEDIQNAAD VLRPVYDSFN GNDGFVSLEV SPYLAMDAKG
TIAEAEQLWK AVDRRNLMIK VPATEACLPA IQHLISRGIS VNITLLFAQE VYRQVAEAYL
AGLEAYVADG GDPSHVASVA SFFVSRIDSV VDKQLDEKIA QANDPTEKER LTALKGKIAI
ANAKMAYQDY KRLFSGARWE RLAAKGAKPQ RLLWASTGTK NKDYSDVLYV EELIGPNTVN
TVPPATLDAF RDHGKVRDSL EEDVEAAQAA LEALAKTGIS LDEITAELVI DGVKQFADAA
DKLYGAVAHK RAVVLGERLG QQSIAVAADL DKKVQAATED WRKTAKIRRL WHKDSSVWTG
KDEHKWLGWL TCVEKADIAD YEDYAQRVKG QKFSDAVVLG MGGSSLGPEV LARTFPRKAG
FPRLHVLDST DPAQVRAMEK AIDISKTVFI VSSKSGGTTE PNAMKDYFFA RVSEAIGANK
AGHRFIAVTD PGSSLEKAAK AQGFARVFHG EPSIGGRYSV LSPFGLVPAA TAGIDVRKLV
TNAQAMVRSC GPDVPPLQNP GVQLGLAMGL AGLDGRDKVT IFASPRIADF GAWAEQLIAE
STGKEGKGLI PIDGEPIGDP ADYGSDRFFI DIRVEGDDIP DHDAKLAALE DAGHPVVRIV
ISSIDQLGQE FFRWEMATAV AGAALGINPF DQPDVESAKI KTRELTAAFE QTGALPAEEP
VISVKGCELY TDAQNAESLR EHGADGTLAS WLKAHLGRAS DGDYIALLGY IEHNGANTDA
LQRIRLKLRD AKHLATCAEF GPRFLHSTGQ AYKGGPDSGV FLQITADDAQ DLPIPGQKAS
FGVIKAAQAR GDFDVLTERG RRALRVHLKG NLKSGLKMLD SAITEALS
|
|---|
| |