Gene BBta_6284 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6284 
Symbol 
ID5150904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6531604 
End bp6532401 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content63% 
IMG OID640560992 
Productputative periplasmic-binding protein 
Protein accessionYP_001242109 
Protein GI148257524 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAAGT GGCACTGGCT GCGCAATGCA GCGCTGATCG CTGCGGTATT TGCGTTGTTC 
AGCAACGGCG CTGATGCGGC CAGTTTGAAG GAGGAGATCG CGCCGACCGG CAAGCTGCGC
GTGGCTGTGG CGGTGGGCCC GGCGGGCGGG GCGTTCTGGT GCGTCAAATC CGACAGTGGA
TATACGGGGG TGCCTGTTGA ACTGGGCAAG GCGATGGCCG CCCAGGCCGG CGTGCCGGTC
GAGTTCGTCG AACATCCGAA CGCGAACGCG ATCGTCGAGG ATGCCGCACA GGGCGCCTGG
GATGTCACCT TCATTCCCAA GGACGCCGAG CGTGAGAGCA AGCTCTCATT CGGCCCCGTC
TACGACTCCG TCGATACGAC GTTCATCATC CGCGCCGGGC TCGACATTCC GAACATCGCT
GCACTCGACC AGGCCGGCCA TGAGGTTGCC GCGATCAACG ACACGACCGT ACTGCGGGCG
ACGAAGGGGT TGATGAAAAA GGCGACGGTG ACCGGGTTCA AATCCTACGA CGAGGTCCAC
GCGCTGCTGT CGGCCGGCGA GATCGATGCG CTGGCGCTGG CCCGCGATCA ACTCACGATC
CTTGCCAAGC AAATCCCGGG CACCAAGGTG CTCAGCGACA CCTTCAAGAA GACGGACACG
GCCGTCGCGG TCCCGCTCAA ACACCCGCAA TCGCAGGCCT TCGTGACCAA GTTCATGACG
GACGCAAAAG CAAATGGTCT GCTCAAGAAG GCCTACGGCG CCAACAATCT GAGCGAATCG
ACGCTGTTCA CGCAGTGA
 
Protein sequence
MLKWHWLRNA ALIAAVFALF SNGADAASLK EEIAPTGKLR VAVAVGPAGG AFWCVKSDSG 
YTGVPVELGK AMAAQAGVPV EFVEHPNANA IVEDAAQGAW DVTFIPKDAE RESKLSFGPV
YDSVDTTFII RAGLDIPNIA ALDQAGHEVA AINDTTVLRA TKGLMKKATV TGFKSYDEVH
ALLSAGEIDA LALARDQLTI LAKQIPGTKV LSDTFKKTDT AVAVPLKHPQ SQAFVTKFMT
DAKANGLLKK AYGANNLSES TLFTQ