| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6239 |
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| Symbol | |
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| ID | 5149544 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 6482464 |
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| End bp | 6483591 |
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| Gene Length | 1128 bp |
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| Protein Length | 375 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640560950 |
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| Product | putative cation efflux membrane fusion protein |
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| Protein accession | YP_001242067 |
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| Protein GI | 148257482 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAACGC CCTTCCGTGT TGCCTGTTAT TTGCCGCGCG CCCTGATCGC GAGCGCGCTT
GTCCTGTTGG CACTCGGGAC GTCACCCGCC AGAGCGGTGG CCGAGGATGT GAAGCTCACC
GCCGAGCAGG CACGCAATCT CGGCATCCGC GTCACGCATC CCGTCCCGAG TCCGACCGAC
AAGACGCTGC CCTATCCGGC ACAGATCGTC ATCCCCACAC CTCAGCTCTG GGTCGTCAGC
GCGCCGGTGG CCGGCATGGT CACGAATCTG GCGGTCGGGC GCGGTGACCG CGTCACCACC
GGACAACCGC TGCTGACATT GGAGAGTCCG AGCTTCGTCT CGCTGCAACG CGAATATCTA
CATGCGCTGG CCCAGGAGGT TCTCGCCGCC CAGCAGTTGA AGCGGAACGC CGATCTGTTC
GACGGCAAGG CGGTGCCGCA GCGCGTGCTG GAATCGAGCC AGGCCGAAGC ACGCCAGGCC
AGCATCGTGG TCGCGGAGCG ACGGCAGATG TTGCATCTCA GCGGTCTCTC CGACGACGCG
ATTGCGCGGC TGACCAACGA GGCGGCGATC AGCGCCACCT TGACGGTGAA CGCGCCCCAG
GCCGCTTCCG TGGTCGAGAT CGCGGTGTCG CCCGGCCAGC GGATGGAGCA GTCCGCACCG
CTGGTGAAGC TCGCACGGCT GTCGCCGCTC TGGGTCGAGA TTGCGATTCC GGCCACGAAT
ATCGGTGCAA TCAAGATCGG CGCCAAGGTC GAGATCGACG GCTATCCGAC TCCGGGCCGC
GTCATCCTGG TGTCCGAGAC GACGGACGCC GCCACCCAGA CGATCCTCGT CCGGGCCGAG
ATTCCGAACA ATGGCGAATT GCATTCCGGG CAGACTGCAG CCGCGCGCAT CGGCTTCATC
TCCGCCGGAG AGAGCGCCTG GGAGATTCCG TATAGCGGCC TCGTCCGGCG CGGCGAGCAG
ACCTCGATCT TCGTCGCGAT CGAGGGCGGC TTCCGGCAGG TTCCGGTGAC GCTGCTCGCC
GAGGATCAGG ATCACGTCGT CGTATCAGGT CCGATCACCG AGCAGAACGA CGTCGCCGTC
GGCGGCATTT CGGCGCTGCG CGGCATTCTC CTGCGGCTGG GGCAATGA
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| Protein sequence | MPTPFRVACY LPRALIASAL VLLALGTSPA RAVAEDVKLT AEQARNLGIR VTHPVPSPTD
KTLPYPAQIV IPTPQLWVVS APVAGMVTNL AVGRGDRVTT GQPLLTLESP SFVSLQREYL
HALAQEVLAA QQLKRNADLF DGKAVPQRVL ESSQAEARQA SIVVAERRQM LHLSGLSDDA
IARLTNEAAI SATLTVNAPQ AASVVEIAVS PGQRMEQSAP LVKLARLSPL WVEIAIPATN
IGAIKIGAKV EIDGYPTPGR VILVSETTDA ATQTILVRAE IPNNGELHSG QTAAARIGFI
SAGESAWEIP YSGLVRRGEQ TSIFVAIEGG FRQVPVTLLA EDQDHVVVSG PITEQNDVAV
GGISALRGIL LRLGQ
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