Gene BBta_6216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6216 
Symbol 
ID5150072 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6463730 
End bp6464470 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content66% 
IMG OID640560927 
Producttwo component transcriptional regulator 
Protein accessionYP_001242045 
Protein GI148257460 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCAGA CACAACCACA CATCCTTGTC GTCGAGGACG ACCGCGAAAC GCGGACGCTG 
ATCGCGAAAT ATCTGCGCAA CAATTCCTGC AATGTCACGA CCGCGACCGA CGGCCGCGAG
ATGACCCGCA TCATGGGCGA TCACCGGATC GACCTGTTGA TCCTCGACGT GATGTTGCCG
GGCGAGGACG GCCTGACCCT CTGCCGCAAG CTACGCGCCG AATCGCAGGT GCCGATCATC
ATGCTCACTG CGCGGGGCGA GGATGTCGAC CGCATTCTCG GGCTGGAAAT GGGCGCTGAC
GACTATCTGC CGAAGCCGTT CAATCCGCGC GAGCTACTCG CCCGGATCAA TGCCGTGCTG
CGCCGGCAGG CCGCCGCGAT GACCGCAAGC GCAACCGAGG GCGCGACCGC GCTGAGCTTC
CTCGGCTGGC GGATCGATTT CCGGCTGCGC GAGCTGCGCA ATCCCGAAGG CGCACGCGTC
GCCATGACCA GCGCCGAGTT CGATCTGTTG CGCACCTTCT GCGAACGGCC GGGGCGCGTG
CTGTCGCGCG ACAGCCTGCT CGACCTGACG CAGGGCCGCA GCGCCGGCTC GTTCGAACGC
TCCATCGACG TGCTGGTCAG CCGCATCCGC CGCAAGATCG AGCCGGATCC GCAGGAGGCC
ACCATGATCA AGACGGTGCG GTCCGGCGGC TACATGTTCA CGCCTGTCGT CGAGGTGGTG
ACGGCGCCGC AGAACCACTG A
 
Protein sequence
MAQTQPHILV VEDDRETRTL IAKYLRNNSC NVTTATDGRE MTRIMGDHRI DLLILDVMLP 
GEDGLTLCRK LRAESQVPII MLTARGEDVD RILGLEMGAD DYLPKPFNPR ELLARINAVL
RRQAAAMTAS ATEGATALSF LGWRIDFRLR ELRNPEGARV AMTSAEFDLL RTFCERPGRV
LSRDSLLDLT QGRSAGSFER SIDVLVSRIR RKIEPDPQEA TMIKTVRSGG YMFTPVVEVV
TAPQNH