Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_6138 |
Symbol | |
ID | 5156256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 6366898 |
End bp | 6367704 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640560850 |
Product | hypothetical protein |
Protein accession | YP_001241969 |
Protein GI | 148257384 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.214964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0272173 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGCTC CGTCTCCCAA TTTCGGTTCG TCACCGCTGC CGCACGGCAT GCCATCGTCC TCGGCTGCAG CGCGTTTCGA GCCCTGTACC GTCGCCGGCG AGGAGGCTCC GGTCTGGCTC GCAGCCGCGT TTGCCGTCGC CGGCGTGCTC ATCGCCATCA TGTCGGCCGC GCTGTGGCAG CAGAGCCTGG CACGCACGCC CGAGGTCGCC GCCTCAGCCC CGCCGGCGGT GACGCAGGCG CCAATGCCAG CGCCGGCGGA GCGGACGCCC GAGCCGATGC TGAAGCCGCC GGAGACGCCG TCGCCGGAGC CGTTGCAGAC CCCTGTGACG ATCGCAGCCC CAGCCGCGGC GCCGGAGCCT GTCATCAGCG TGCCCAGTCC GACACCCGTC GCCGCCCTGC CCGAACCGGC GACCGCCGCC CGCAAGGCCG CCACCGAATG TTTCGCGCCG CTGTCGATCG CCTTCGAGCG CGGCAGCACG CGGCCCAATC CGGCCGACGT GAAACGGTCG CTGCCGATCC TGCAAAGCGC GTTGGCGCGC CATGGCGACG CGGCGGTCCT GGTCGAGGGG CATACCGACG CCAGCGGCAG CGAGGATCTC AACGTGCTCC TGAGCTATTC GCGCGCCAAG GCCGTCGCGG AGCTATTGAA GCGCGATGGC ATCGCGGCGC ATCGCATCAC GGTGCGCGCC GCGGGGGCCG GCGAGGCGCG CGGCACGGCC GAGGCGGTGG CCGGCGACCG CAAGGCGGTC CTGCGGCTCG CCGGCGTCGA CGATTGCGAT CAACTCACGG CAGCGAAGCG ACCATGA
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Protein sequence | MLAPSPNFGS SPLPHGMPSS SAAARFEPCT VAGEEAPVWL AAAFAVAGVL IAIMSAALWQ QSLARTPEVA ASAPPAVTQA PMPAPAERTP EPMLKPPETP SPEPLQTPVT IAAPAAAPEP VISVPSPTPV AALPEPATAA RKAATECFAP LSIAFERGST RPNPADVKRS LPILQSALAR HGDAAVLVEG HTDASGSEDL NVLLSYSRAK AVAELLKRDG IAAHRITVRA AGAGEARGTA EAVAGDRKAV LRLAGVDDCD QLTAAKRP
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