Gene BBta_6138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_6138 
Symbol 
ID5156256 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6366898 
End bp6367704 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content72% 
IMG OID640560850 
Producthypothetical protein 
Protein accessionYP_001241969 
Protein GI148257384 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.214964 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0272173 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCTC CGTCTCCCAA TTTCGGTTCG TCACCGCTGC CGCACGGCAT GCCATCGTCC 
TCGGCTGCAG CGCGTTTCGA GCCCTGTACC GTCGCCGGCG AGGAGGCTCC GGTCTGGCTC
GCAGCCGCGT TTGCCGTCGC CGGCGTGCTC ATCGCCATCA TGTCGGCCGC GCTGTGGCAG
CAGAGCCTGG CACGCACGCC CGAGGTCGCC GCCTCAGCCC CGCCGGCGGT GACGCAGGCG
CCAATGCCAG CGCCGGCGGA GCGGACGCCC GAGCCGATGC TGAAGCCGCC GGAGACGCCG
TCGCCGGAGC CGTTGCAGAC CCCTGTGACG ATCGCAGCCC CAGCCGCGGC GCCGGAGCCT
GTCATCAGCG TGCCCAGTCC GACACCCGTC GCCGCCCTGC CCGAACCGGC GACCGCCGCC
CGCAAGGCCG CCACCGAATG TTTCGCGCCG CTGTCGATCG CCTTCGAGCG CGGCAGCACG
CGGCCCAATC CGGCCGACGT GAAACGGTCG CTGCCGATCC TGCAAAGCGC GTTGGCGCGC
CATGGCGACG CGGCGGTCCT GGTCGAGGGG CATACCGACG CCAGCGGCAG CGAGGATCTC
AACGTGCTCC TGAGCTATTC GCGCGCCAAG GCCGTCGCGG AGCTATTGAA GCGCGATGGC
ATCGCGGCGC ATCGCATCAC GGTGCGCGCC GCGGGGGCCG GCGAGGCGCG CGGCACGGCC
GAGGCGGTGG CCGGCGACCG CAAGGCGGTC CTGCGGCTCG CCGGCGTCGA CGATTGCGAT
CAACTCACGG CAGCGAAGCG ACCATGA
 
Protein sequence
MLAPSPNFGS SPLPHGMPSS SAAARFEPCT VAGEEAPVWL AAAFAVAGVL IAIMSAALWQ 
QSLARTPEVA ASAPPAVTQA PMPAPAERTP EPMLKPPETP SPEPLQTPVT IAAPAAAPEP
VISVPSPTPV AALPEPATAA RKAATECFAP LSIAFERGST RPNPADVKRS LPILQSALAR
HGDAAVLVEG HTDASGSEDL NVLLSYSRAK AVAELLKRDG IAAHRITVRA AGAGEARGTA
EAVAGDRKAV LRLAGVDDCD QLTAAKRP