| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_6034 |
|---|
| Symbol | |
|---|
| ID | 5154494 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 6255139 |
|---|
| End bp | 6255810 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640560749 |
|---|
| Product | TetR family transcriptional regulator |
|---|
| Protein accession | YP_001241871 |
|---|
| Protein GI | 148257286 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1309] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCGC GCACGACCAC GAAACGCAAG GCTCGCAAGG CGGCGACGCC TGATACGGAG
ACCCGGGCCA AGACGCGCGG CGGCGAGGCC AATGTGGAGC GCATCCTCGA CGCCGCGCTC
TCGGTGTTCG CCATGGACGG CTTCGCCGGC GCTCGCATCG ACGCGATCGC CGATCTGGCG
GGCTTGTCGA AGCCGAACCT GTTGTATTAC TTCCGCACCA AGCAGGATCT CTACCTCGCC
GTGCTCAAGC GGACGCTGGA CATGTGGCTG GTGCCGCTGG CCAGGATCGA GCCGCAGAGC
GATCCGCGCA CGGCGCTGAC CGACTACATC ACCACGAAGC TGGAATACGC CCGCGACCAT
CCCAAGGCAT CGCGGCTGTT CGCGATCGAG GTGATGCGCG GCGCGCCGGT GCTCGGCAAG
GTGCTGCAGG ACGACCTGAA GCAGCAGGTC GACGGCAAGG TCACCTTGCT GCGGCGCTGG
ATGACCCAGG GCAAGCTGCC GCGCCGGGAT CCGCATCATC TCATCTTCAT GATCTGGGCG
ACGACGCAGC ATTACGCCGA TTTCTCCACG CAGGTCGAGG CCATCACCGG CCGCACACTT
CAGCATCCCG CCTTCTTCAC CGCGGCACGG CAGTCGATCC TCGACGCCGT GCTCGGGCCG
GAGCAGGACT GA
|
|---|
| Protein sequence | MAARTTTKRK ARKAATPDTE TRAKTRGGEA NVERILDAAL SVFAMDGFAG ARIDAIADLA
GLSKPNLLYY FRTKQDLYLA VLKRTLDMWL VPLARIEPQS DPRTALTDYI TTKLEYARDH
PKASRLFAIE VMRGAPVLGK VLQDDLKQQV DGKVTLLRRW MTQGKLPRRD PHHLIFMIWA
TTQHYADFST QVEAITGRTL QHPAFFTAAR QSILDAVLGP EQD
|
|---|
| |