Gene BBta_5975 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5975 
Symbol 
ID5154004 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6186115 
End bp6187053 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content66% 
IMG OID640560698 
Productputative acetamidase/formamidase family protein 
Protein accessionYP_001241820 
Protein GI148257235 
COG category[C] Energy production and conversion 
COG ID[COG2421] Predicted acetamidase/formamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.343396 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAAAC GCCACGAAAT TCCCGCCACG CATGAGAGCA TGGTGTGGGG CTATCTCGAC 
AGCACCACGC CACCAGTGCT CGAAGTCGCC TCCGGCGACA CCGTGACGCT GCATTCCTTC
CCGGCCGGCG GCAAGGAGAC CCTTCCCGAG GACCGCAGCA TCGTTCCACC CGGCTATCTC
ACCGCGCTCG ACACCCTGAT CCAGGGGCCG GGCCCGCATT TCATCACTGG TCCCGTCCAT
GTGAAGGGCG CGCAGCCCGG TGATACGCTC CAGGTCGACA TCCTCGACGT CAAGGTCAGC
CAGGACTGGG GCTTCGTCTC GATCCTGCCT TTGCTCGGCA CCCTGCCCGA CGAGTTCACC
GACTACGAGA CGATCCACCC GAAGGTCGAT CACGCGCGCC AGGTCTGCAT CATGCCCTGG
GGCACCGAGA TCGCGCTCGA TCCGTTCTTC GGCATCATCG CGACCGCGCC GCCGCCCGCC
TGGGGGCGCT GCGGGTCGCC GGTACCGCGC AGCTTCGGCG GCAACATGGA CAACAAGGAG
CTGCGGCCGG GCACGACGCT GTATCTGCCG GTGTTCAACG AGGGCGCATT GTTCTTCGCC
GGCGACGGCC ATGGCGTGCA GGGCGACGGC GAGGTCTGCA TCACCGCGCT CGAGACCGGC
GTCACCGGCA CCTTCCGGCT CACGGTGCGC AAGGACATGG ACATCACCTG GCCCTTCGCC
GAGAACGCCA CCCATCTGAT GTCGATCGGC CTCGACGAGG ATCTCGACGA CGCCGCCAAG
CAGGCGGTGC GCGAGATGGT CAAGCATGTC TGCGCCCGCA CCAACCTGTC GCGCAATCAG
GCCTACATGC TGTGCTCGCT GGCCGGCAAT CTGCGCGTGA CCCAGCTGGT CGACGGCAAC
AAGGGCATCC ACATGCTGCT GCCGAAGGCC TATCTGTAG
 
Protein sequence
MSKRHEIPAT HESMVWGYLD STTPPVLEVA SGDTVTLHSF PAGGKETLPE DRSIVPPGYL 
TALDTLIQGP GPHFITGPVH VKGAQPGDTL QVDILDVKVS QDWGFVSILP LLGTLPDEFT
DYETIHPKVD HARQVCIMPW GTEIALDPFF GIIATAPPPA WGRCGSPVPR SFGGNMDNKE
LRPGTTLYLP VFNEGALFFA GDGHGVQGDG EVCITALETG VTGTFRLTVR KDMDITWPFA
ENATHLMSIG LDEDLDDAAK QAVREMVKHV CARTNLSRNQ AYMLCSLAGN LRVTQLVDGN
KGIHMLLPKA YL