Gene BBta_5972 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5972 
SymboliorA 
ID5153785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6182584 
End bp6183036 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content63% 
IMG OID640560695 
Productisoquinoline 1-oxidoreductase alpha subunit 
Protein accessionYP_001241817 
Protein GI148257232 
COG category[C] Energy production and conversion 
COG ID[COG2080] Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.582154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAGG TGAAAATCAA CGGGCAGGAG CAGAGCTGGG ATGGTGATCC GAGCCTGCCG 
CTGCTGTGGT ATCTGCGCGA TGAGCTCGGC CTGACCGGCA GCAAATATGG CTGCGGCCAG
GCGCTGTGCG GTGCCTGCAC CGTGATGGTC GACAAGGAAG CTGCGCGAGC CTGCATCACT
GCGATCTCGG ATGTGGCGGG GCGCGAGGTC ACGACCATTG AAGGCCTGCA TCCGACCGGC
GACCATCCGG TGCAGAAGGC GTGGCGACAG GTCAACGTGC CGCAATGCGG CTTCTGCCAG
GCCGGCCAGA TCATGCAGGC GGCCGCGCTG CTCAACCAGA ATCCGAAGCC GTCGCATGAC
CAGATCAGGG ACGCGATGTC CGGCAACATC TGTCGCTGCG GCTGCTATCA GCGCATCGAA
AACGCGGTTC ATCTGGCCTC GACGGGAGTG TGA
 
Protein sequence
MIKVKINGQE QSWDGDPSLP LLWYLRDELG LTGSKYGCGQ ALCGACTVMV DKEAARACIT 
AISDVAGREV TTIEGLHPTG DHPVQKAWRQ VNVPQCGFCQ AGQIMQAAAL LNQNPKPSHD
QIRDAMSGNI CRCGCYQRIE NAVHLASTGV