Gene BBta_5856 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5856 
Symbol 
ID5150385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6093518 
End bp6094402 
Gene Length885 bp 
Protein Length294 aa 
Translation table11 
GC content63% 
IMG OID640560583 
Productputative PhnE protein, phosphonate ABC transporter, putative membrane protein 
Protein accessionYP_001241705 
Protein GI148257120 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3639] ABC-type phosphate/phosphonate transport system, permease component 
TIGRFAM ID[TIGR01097] phosphonate ABC transporter, permease protein PhnE 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0234805 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGTCG CCGTTTCGAT CCTGCCGAGC CAGCAACTTG CGGCTCTGAA CGGCGTCTAT 
CGCCGGGCGG TGTTCCGCCG TCGTCTGCGC TTTGCGATCT CGGCGGTGGT GTTCATCGCC
GTGCTGCTGG TTGCGGCGGT CGGCGCCGAG GTCAATCTGC GGACGCTCTA CACCTACTTC
GGCAATTTCG TCAGCTATTT CGATCGCATC TTCACGCTCG ATGACGGTCA GCGGGTCTGG
ACCAACATTC CCGAATGGTT CTGGGGCCTC AAGAAGTGGC TCAAACTGCT CGGCGAGACG
CTGCTGATCA GCTATGTCGG CACCATCGCG GGCATGGTCG TGGCATTCTG CCTCAACTTC
CTCGCCGCGG AGAACACCTC GCCGGCGCCC TGGATCCGCT TCGTGGTACG GCGCCTGCTC
GAATTCGCCC GTACCGTGCC GGGCATCGTG TTCGCGCTGA TTTTCGTCAT CGCCTTCGGT
CTTGGCCCGA TCCCCGGCGT GCTCGCGATC GCCGTGCATT CCAGCGGCGC GCTCGGCAAG
CTGTTCTCCG AGGTGGTCGA AAACGCCGAC ATGAAGCCGG TCGAGGGCAT TCGCGCGACC
GGCGCAAGCT GGCTGTCCTG CATGCGCTTC GCGGTGCTGC CGCAGGTGAT CGCCGGATTT
TCCAGCTACA CGCTGTTGCG CTTCGAAATC AACGTGCGCG AAGCCTCGGT GATGGGCTTC
GTCGGCGCCG GCGGCATCGG GCAGGAACTC GTGGTCGCGA TCCGCAAATT TTACTACTCG
GATGTCAGCG CCATCCTCGT CATGATCGTG CTGACGGTGT TCCTGATCGA TATCAGCACC
GGCTGGCTGC GCGGACGGTT GTTTGGCGCG GAGGCCCGCT CATGA
 
Protein sequence
MAVAVSILPS QQLAALNGVY RRAVFRRRLR FAISAVVFIA VLLVAAVGAE VNLRTLYTYF 
GNFVSYFDRI FTLDDGQRVW TNIPEWFWGL KKWLKLLGET LLISYVGTIA GMVVAFCLNF
LAAENTSPAP WIRFVVRRLL EFARTVPGIV FALIFVIAFG LGPIPGVLAI AVHSSGALGK
LFSEVVENAD MKPVEGIRAT GASWLSCMRF AVLPQVIAGF SSYTLLRFEI NVREASVMGF
VGAGGIGQEL VVAIRKFYYS DVSAILVMIV LTVFLIDIST GWLRGRLFGA EARS