Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_5856 |
Symbol | |
ID | 5150385 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | - |
Start bp | 6093518 |
End bp | 6094402 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640560583 |
Product | putative PhnE protein, phosphonate ABC transporter, putative membrane protein |
Protein accession | YP_001241705 |
Protein GI | 148257120 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3639] ABC-type phosphate/phosphonate transport system, permease component |
TIGRFAM ID | [TIGR01097] phosphonate ABC transporter, permease protein PhnE |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0234805 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGGTCG CCGTTTCGAT CCTGCCGAGC CAGCAACTTG CGGCTCTGAA CGGCGTCTAT CGCCGGGCGG TGTTCCGCCG TCGTCTGCGC TTTGCGATCT CGGCGGTGGT GTTCATCGCC GTGCTGCTGG TTGCGGCGGT CGGCGCCGAG GTCAATCTGC GGACGCTCTA CACCTACTTC GGCAATTTCG TCAGCTATTT CGATCGCATC TTCACGCTCG ATGACGGTCA GCGGGTCTGG ACCAACATTC CCGAATGGTT CTGGGGCCTC AAGAAGTGGC TCAAACTGCT CGGCGAGACG CTGCTGATCA GCTATGTCGG CACCATCGCG GGCATGGTCG TGGCATTCTG CCTCAACTTC CTCGCCGCGG AGAACACCTC GCCGGCGCCC TGGATCCGCT TCGTGGTACG GCGCCTGCTC GAATTCGCCC GTACCGTGCC GGGCATCGTG TTCGCGCTGA TTTTCGTCAT CGCCTTCGGT CTTGGCCCGA TCCCCGGCGT GCTCGCGATC GCCGTGCATT CCAGCGGCGC GCTCGGCAAG CTGTTCTCCG AGGTGGTCGA AAACGCCGAC ATGAAGCCGG TCGAGGGCAT TCGCGCGACC GGCGCAAGCT GGCTGTCCTG CATGCGCTTC GCGGTGCTGC CGCAGGTGAT CGCCGGATTT TCCAGCTACA CGCTGTTGCG CTTCGAAATC AACGTGCGCG AAGCCTCGGT GATGGGCTTC GTCGGCGCCG GCGGCATCGG GCAGGAACTC GTGGTCGCGA TCCGCAAATT TTACTACTCG GATGTCAGCG CCATCCTCGT CATGATCGTG CTGACGGTGT TCCTGATCGA TATCAGCACC GGCTGGCTGC GCGGACGGTT GTTTGGCGCG GAGGCCCGCT CATGA
|
Protein sequence | MAVAVSILPS QQLAALNGVY RRAVFRRRLR FAISAVVFIA VLLVAAVGAE VNLRTLYTYF GNFVSYFDRI FTLDDGQRVW TNIPEWFWGL KKWLKLLGET LLISYVGTIA GMVVAFCLNF LAAENTSPAP WIRFVVRRLL EFARTVPGIV FALIFVIAFG LGPIPGVLAI AVHSSGALGK LFSEVVENAD MKPVEGIRAT GASWLSCMRF AVLPQVIAGF SSYTLLRFEI NVREASVMGF VGAGGIGQEL VVAIRKFYYS DVSAILVMIV LTVFLIDIST GWLRGRLFGA EARS
|
| |