Gene BBta_5852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5852 
Symbol 
ID5150785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp6089852 
End bp6090637 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content64% 
IMG OID640560579 
Productmolybdenum ABC transporter permease 
Protein accessionYP_001241701 
Protein GI148257116 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.581419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.526214 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGACC GGATCATCTT CGCCCTGCAA CTTCTGTTCA CCTTGATCGT CGCGGCGTTT 
CTCGCCGTGC CTGCCGCGCT TTCGATCGCG GCGGGCGTGA CCGTCAACTA CTTCCGCGGC
ATCCAGTCCG GCGTCACGCT GCAATGGGTC GCCCAGGTCT TGGATCTCTA TGCCGGCACG
ATCATGGCCT CGATCGCGAT CGCGCTGGGG ACGCTGCTGG TCACGCTCGT CGTTGGCGTT
CCCGCAGCCT ACGCGCTCTA TGTCCGCGGC GGCCGGCTGG CTCGCCTGGT CGAGGAGATC
ATCACCTTGC CGGTCGCGAT TCCGGGTCTC GCGCTGGCGC TCGGGCTGCT GTTGTCCTAT
GGCGGCTTCG GCAACTTTCG CCGCTCGTGG CTGTTCATTC TTGCGGGCCA TGTCATCTTC
ACGATGCCGT TCATGGTGCG CTCCGTCATG GCCATCTTCG CCAGCATCGA CGTCAAGTCG
CTGGATGAAG GCGCCGCATC GCTCGGTGCC GCGCCCTGGC GCCGTTTCGT CGATGTCATC
GTGCCCAATG CGGCGCCGGG CATCCTGGCC GGCAGCCTCA TGGTGGTGAC GCTGTCGCTC
GGCGAGTTCA ACCTCACATG GATGTTGCAC ACGCCCTTGA CCAAGACCCT GCCGGTCGGG
CTCGCCGACA GCTACGCGTC GATGCGGCTC GAAGTGGCCT CGGCCTATAC GTTGATCTTC
TTCGTCATGA TCATTCCGCT GTTGGTGGCG ATGCAATGGA TCGGCGAGAG GGGGAGTGCG
AAGTGA
 
Protein sequence
MRDRIIFALQ LLFTLIVAAF LAVPAALSIA AGVTVNYFRG IQSGVTLQWV AQVLDLYAGT 
IMASIAIALG TLLVTLVVGV PAAYALYVRG GRLARLVEEI ITLPVAIPGL ALALGLLLSY
GGFGNFRRSW LFILAGHVIF TMPFMVRSVM AIFASIDVKS LDEGAASLGA APWRRFVDVI
VPNAAPGILA GSLMVVTLSL GEFNLTWMLH TPLTKTLPVG LADSYASMRL EVASAYTLIF
FVMIIPLLVA MQWIGERGSA K