Gene BBta_5642 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5642 
Symbol 
ID5152419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5882466 
End bp5883416 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content62% 
IMG OID640560384 
Producthypothetical protein 
Protein accessionYP_001241506 
Protein GI148256921 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGT CATTGAAGGT TGCGATTGCT GAAGGACTGC CACCTCAAAC GCTCTTCAAG 
CTGCGCTCGA TCAAGCGCGC CCTGATGGGG CAGCCGCCGC CGGAGCGCCC GCAAGCGGCC
GAAGCGCCCG CGCCTGCATC CGAAGCCGTC TCCGCGCCCA CTGATGAGGT GCAACCGGCT
GCGCATGAAC CGCGGACGAG ACAGACCGAG GCGCTGGAAC GGCTCGACGC CCACAAGATC
AGCGCGCCGT ATCTGTTCTT CGACGTCGAT GACGTGCTGA TCCTGCCGGC CAAGGAGATC
GCGCGCACGC TGACCCTGAG CGTGATGTAC ATCAACAGCG CCGACGTAAA GGGCGACATC
GCCGAATTCG GCACCATGGG CGGCTTCACC GCGCGAACGC TGGCCAACGC GATGGTGTTC
GATCCGCGCT ACCAGCCGAA CCATCCGCTG CGCACCTTGC GTTTGTTCGA CAGTTTCGAG
GGGCTGCCGG AGATCACCGA CAAAGTCGAC CTCGAGTCGC AGCACGTGAA GTCCGGAACC
TGGTCAAAAG GCGGTTGCCG GATCCTCAGT GCAAACGAAC TGCGGACCAT GGTCGAGGCG
ATCATTCCAC CGAGCCGGGT CCGGATCTAC GAAGGCTGGT TCTCTGATAC CGTCAAGCAG
CTGCCTGACG ATACGCGCCT CGCCCTGATC CATTTCGACG GCGATCTGTA TTCGTCGACC
ATGGATGCGC TGGTCCCGTG TTTCGAACGC GGCTTCATTT CCAAGGGCGC CGTGATCTGC
TTTGACGACT GGAACTGCAA CGAAGCCGAC CCGGACGCCG GCGAGCGCAA GGCCTGGGCC
GATCTGGTCA GTCGTTTCAA TATCGTCGCC AGCCACTCCG GCGACTACGC GATCCAGAGC
ACGAAGTTCA TCATCCATTC CTACCGCGGC ATGAAGCCGC GGATGGACTG A
 
Protein sequence
MTKSLKVAIA EGLPPQTLFK LRSIKRALMG QPPPERPQAA EAPAPASEAV SAPTDEVQPA 
AHEPRTRQTE ALERLDAHKI SAPYLFFDVD DVLILPAKEI ARTLTLSVMY INSADVKGDI
AEFGTMGGFT ARTLANAMVF DPRYQPNHPL RTLRLFDSFE GLPEITDKVD LESQHVKSGT
WSKGGCRILS ANELRTMVEA IIPPSRVRIY EGWFSDTVKQ LPDDTRLALI HFDGDLYSST
MDALVPCFER GFISKGAVIC FDDWNCNEAD PDAGERKAWA DLVSRFNIVA SHSGDYAIQS
TKFIIHSYRG MKPRMD