| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5590 |
|---|
| Symbol | |
|---|
| ID | 5153979 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5816552 |
|---|
| End bp | 5817241 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640560333 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001241455 |
|---|
| Protein GI | 148256870 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3619] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.424596 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGCGA CTGAGTCCCG CATCGTGCCG CTGCTGCTCA GCGTCAATGC CGGCTATGTC
GATACCGCGG GTTTCCTGGC GCTGCAGGGC CTGTTCACGG CGCATGTCAC CGGCAATTTC
GTCACGCTCG GCGCGGCGCT CGCCTTGGGC ACGTCCGGCG CGGTGGCCAA GCTGCTGGCG
CTGCCGGTGT TCTGCGCGGT GGTGATCGCG ACCCGCCTGA CCGGTACGCT GCTGTCGCGC
AGATGGCCGC GGGCTTTCGA GATCCTGCTG GGGGTGAAGC TGGTGCTGCT GGTGCTCGGC
GCCGCGCTCG CGATCCATTT CGGCCCGTTC CATGAAGGCG ACAGCCGCGA GGCGATCATC
ACCGGCATGG TGCTGGTGGC GGCAATGGCG ATCCAGAACG CGGTGCACCG GATTCACCTG
CCGAGCGCGC CGCCTTCGAC CTTGATGACC GGAACCACGA CCCAGGTGAT GATCGATCTC
GCCGACCGGA TCTATGTCGG TGACAAGGGC CCGGCGGCGC CGCCAGCGCG GCTCGTGCAG
ATGGCGGTGA ATGTGCTGGC CTTCGCCCTC GGCTGCGGCG CGGCCGCGCT GTTGTTCGTC
CGTCTCGGCA GCTGGTGCTT CGTCGTCCCG CCCGTTGTCG CTGCGCTGGC CCTCGTTGCC
CGCATGGCCG GTCCGCAGCC CGCGCGCTGA
|
|---|
| Protein sequence | MAATESRIVP LLLSVNAGYV DTAGFLALQG LFTAHVTGNF VTLGAALALG TSGAVAKLLA
LPVFCAVVIA TRLTGTLLSR RWPRAFEILL GVKLVLLVLG AALAIHFGPF HEGDSREAII
TGMVLVAAMA IQNAVHRIHL PSAPPSTLMT GTTTQVMIDL ADRIYVGDKG PAAPPARLVQ
MAVNVLAFAL GCGAAALLFV RLGSWCFVVP PVVAALALVA RMAGPQPAR
|
|---|
| |