Gene BBta_5505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5505 
Symbol 
ID5151013 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5723673 
End bp5724443 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content65% 
IMG OID640560250 
Producthypothetical protein 
Protein accessionYP_001241372 
Protein GI148256787 
COG category[S] Function unknown 
COG ID[COG3334] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGCGT TTCGTAACAT CCGAGTCATT CCCGTCGTCC TGATTGCGGT GGCCTGCCTC 
GCGGTCCTGA AGGTGGCCGG CCTCGTGATC GATGGCGGCT ACGTCTTCGA GTACAATCCG
CAGGCGACCA AGCGGTCCTG GGCGCAGGAA AACCTGGGCT ATCCGGGCCG CGAGGACAAT
GACCTCGTCA CCGGCTCGAC CCATGGCGAG CCGAAGGAGA AGAAGGAAGA GGCGCCGAAG
CCGGCCGCCC CGGCGACCAA GCCGGACGGC GTCGTCATCA AGCCGGAAGA AAATCAGCAG
CAGGTGTCGC CGGCAGAGAA GGCGATCCTC GAGCGGCTGC AGTCGCGCCG CCAGGAGCTC
GACGCGCGCG CCCGCGAGAT CGACATCCGC GAGAGCCTGT TGCGCGCCGC CGAGCAGCGC
ATCCAGTCCA AGACCGAGGA GATGAAGGCG ATCGAGAGCC GGATTTCCGG TGCGCAGGCG
GCGAAGACGG AGGCCGACAA CGCCCGCTTC AAGAGCATCG TCACGATGTA TGAGGGCATG
AAGCCGAAAG ACGCCGCCAA GGTGTTTGAC AGGCTCGACA TGTCGGTGCT GATCGAGATC
GCGTCCCAGA TCGCCCCGCG CAAGATGTCC GACATTCTCG GCCTGATGAC GCCGGAGGCG
GCCGAGCGGC TCACGGTGGA GCTGGCGCGC CGGGCGGGCG CGGACAAGCC CGACACCAGC
GCCGAACTGC CGAAGATCGA AGGCAAGATC GTGCCGGTCA GGACCAATTG A
 
Protein sequence
MNAFRNIRVI PVVLIAVACL AVLKVAGLVI DGGYVFEYNP QATKRSWAQE NLGYPGREDN 
DLVTGSTHGE PKEKKEEAPK PAAPATKPDG VVIKPEENQQ QVSPAEKAIL ERLQSRRQEL
DARAREIDIR ESLLRAAEQR IQSKTEEMKA IESRISGAQA AKTEADNARF KSIVTMYEGM
KPKDAAKVFD RLDMSVLIEI ASQIAPRKMS DILGLMTPEA AERLTVELAR RAGADKPDTS
AELPKIEGKI VPVRTN