Gene BBta_5466 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5466 
Symbol 
ID5150752 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5686339 
End bp5687385 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content62% 
IMG OID640560213 
Producthypothetical protein 
Protein accessionYP_001241335 
Protein GI148256750 
COG category[T] Signal transduction mechanisms 
COG ID[COG2206] HD-GYP domain 
TIGRFAM ID[TIGR00277] uncharacterized domain HDIG 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTC ACCTCGTTGG CGACGATACA GCCAAGCTCG CATTGCTACG CGGCATGCTG 
GCCGAACGCT GCTCGCTCAC ATCTGAATTG ATTGGTGACG CCGATATACG CGGCGGTGAC
ATTGACGCGA TCGTCGTATC CGCAGATCTG CGCGATGTCG ACAACATCAC GGCGTTGAAA
GAAATTTCCG ACCGGCTGGC GCGCATTCCG CGCCGCATCT TCCTGACCAA CCACAAGTCA
CGCCTGTCGA CCGTGCAGGC CTATGCGCTC GGTGCCACGA GCGTCTTGTC GAGTACGCCG
ACCCGCAATC AGCTGCTGGG AAAACTGCTC GATGCCCGCC CGCAATCCAA TGCGAAGAGC
GTTGCGGCCG ACGATCGCCA GGCCGCGTTT GCAGGCGCTT CATGCATCGC CTCGATGTTC
GCGGCGGTGC TCGGCGGCGC CGCGATCGAC GTCGACGAGA CCCGACGTGC CGGCAAGCGG
ATCGCCGACT GCATCGCCGA GAACGGCTTG TCGGATTGGC TTGCGACGGT TCGCCGTCAT
CATGAAGGCA CCTATCAGCA TTGTCTGCTG GTCACCGGCA TTACCGTCGA TTTTGGCCTG
AGCCTTGGCG TTCATAGTAC GGATCTGGAG CGGCTCTACA TGGCCGCGAT GTTTCACGAC
ATCGGCAAGG CGAAGATCCC GCTGGCCATT CTCGACAAGC CGGGCCGCCT CGATACCAAG
GAACGCGCGC TGGTCGAGAC CCATCCGGCG GCAGGTTATG ACGCCCTGAA AGGCACCCCG
GCGATCACGA CCGAGGTGCT CGATGCGGTC CGTCATCACC ACGAGTTTCT CGATGGCAGC
GGCTATCCCG ATGGGCTGAT GGCCGACAGC ATCCCGGACC TCACGCGCAT TCTCACCATC
TCCGACATCT TCTCGGCGCT GATCGAATAT CGCAGCTACA AGCCGGTGAT GGCCCGCGAC
AAGGCCTATG AGATCCTGCA GAGCATGGAG GGCAAGCTTG AGAAGCCGCT GATCGGCGCG
TTCCGCGACG TGGCCCTGAT CCGCTGA
 
Protein sequence
MNVHLVGDDT AKLALLRGML AERCSLTSEL IGDADIRGGD IDAIVVSADL RDVDNITALK 
EISDRLARIP RRIFLTNHKS RLSTVQAYAL GATSVLSSTP TRNQLLGKLL DARPQSNAKS
VAADDRQAAF AGASCIASMF AAVLGGAAID VDETRRAGKR IADCIAENGL SDWLATVRRH
HEGTYQHCLL VTGITVDFGL SLGVHSTDLE RLYMAAMFHD IGKAKIPLAI LDKPGRLDTK
ERALVETHPA AGYDALKGTP AITTEVLDAV RHHHEFLDGS GYPDGLMADS IPDLTRILTI
SDIFSALIEY RSYKPVMARD KAYEILQSME GKLEKPLIGA FRDVALIR