| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5388 |
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| Symbol | rpsD |
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| ID | 5148826 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5611465 |
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| End bp | 5612082 |
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| Gene Length | 618 bp |
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| Protein Length | 205 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640560144 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_001241268 |
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| Protein GI | 148256683 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.311442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.936106 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTAAGC GCAGTGAGGC GAAGTACAAG ATCGATCGCC GCATGGGCCA GAATATCTGG
GGCCGCCCGA AGAGCCCCGT GAACCGCCGC GAATACGGCC CCGGCCAGCA CGGCCAGCGC
CGCAAGGGCA AGCTCTCCGA TTTCGGCGTG CAGCTGCGCG CCAAGCAGAA GCTGAAGGGT
TATTACGCCA ACATCTCCGA GCGCCAGTTC CACGGCATCT ATGTCGAGGC CGGCCGCTTG
AAGGGTGACA CCGGCGAGAA CCTGATCGGC ATTCTCGAGC GCCGTCTCGA CACCGTGGTG
TTCCGCGCCA AGTTCGTCTC GACCATGTTC GCCGCGCGCC AGTTCATCAA CCACGGCCAC
ATCAAGGTGA ACGGCCGCAA GGTCAACATC GCGAGCTACC AGGTCAAGCC GGGCGACGTG
ATCGAGGTCA AGGAAGCCTC GAAGCAGCTC GCCATCGTGC TCGAAGCCAC CCAGCTCGCC
GAGCGTGACG TGCCCGACTA TATCGAGGCC GATCACTCCA AGATGACCGC GAAGTTCATC
CGCATCCCGG CGCTGTCGGA CGTGCCGTTC GCGGTGCAGA TGGAGCCGCA TCTGATCGTC
GAGTTCTACT CGCGCTGA
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| Protein sequence | MTKRSEAKYK IDRRMGQNIW GRPKSPVNRR EYGPGQHGQR RKGKLSDFGV QLRAKQKLKG
YYANISERQF HGIYVEAGRL KGDTGENLIG ILERRLDTVV FRAKFVSTMF AARQFINHGH
IKVNGRKVNI ASYQVKPGDV IEVKEASKQL AIVLEATQLA ERDVPDYIEA DHSKMTAKFI
RIPALSDVPF AVQMEPHLIV EFYSR
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