| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5360 |
|---|
| Symbol | |
|---|
| ID | 5150120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 5587622 |
|---|
| End bp | 5588575 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640560119 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001241243 |
|---|
| Protein GI | 148256658 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3932] Uncharacterized ABC-type transport system, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.290755 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.00309893 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCGATGA ACGATGGCGC ATCCAATGAT GAGGTCTCGG CGGCGCCACG CCGGCACAAT
GGCCCGATCA GCCGGCGGCT GCTCGCGATC GCGCGCACGG TGCGATCGGA GGAGCCGTCG
GTCGGCGAGT TGTTCGACCG CCTGGAGTCG GAAGGTCTCG GCCTCACTTT GCTGCTGCTG
ACGATCCCGG CGCTGATCCC GCTGCCCGGC CCGTTCGGCA TGGTGTTCGG CACCTTCGTC
GCGGTGGTGG CGCTGCAGAT CCTGTTCGGC GCCGAGCGAC TATGGTTGCC GGAGACGGTG
CGGCGCCGGC CAGTCCCGCA GCGGCTGCTG CGCAAGGTCA TCCGGGCCGG GCTCGACTGG
GCCGGCGTTG CCGAGCGCGC CCTGCGCGAG GACCGCCTGG TCTGGCTGAC CGGCCGCACC
GCGCGCATGG TCCTGGCGCT ACCGCTGCTG TTGATGGCGG TCACGATCAT TCTTCCCATC
CCGATGGGCA ATGTAATGCC GGCTCTGGCG CTGATCGCCG CCTCGATCGG CTTCATGGCC
GGCGACGGCC TGGCCGTGCT GGTGTCGATG CTGATCGCGA TGGCCGCCGT GGTGTGGACG
GCGGTGCTGC TCTACACCGG CGCGGCCGCA GCCGACTACG CGGCCACGCT GCTGACGCAT
CTGGGCCTTC ATCTGCGCAG CATGATGCAG AGTCTGGGCG TCGATCTCGG CCTCGCTGCC
GGCGTTGCGA CCGGGTGCGC GGTCGCGGCC GGGCTCACCG CGCTGGCCTT CTGGGTTCAG
GCGGCGCGTC ACCGGCGTCG CCGGCGCGGC CTGTTCGATC CGACGGAGGA CCCGCGGGAG
CGCTCGCGCG CGATGGCGCG GCGCGGGCGT GGCCTGGTCG CGGCCGCGAC CATCGCCACG
GGGGCGGCGG CGATCTTGAT CGCCACGCGC CTGATGCTGA CGGCCTGGAT TTGA
|
|---|
| Protein sequence | MAMNDGASND EVSAAPRRHN GPISRRLLAI ARTVRSEEPS VGELFDRLES EGLGLTLLLL
TIPALIPLPG PFGMVFGTFV AVVALQILFG AERLWLPETV RRRPVPQRLL RKVIRAGLDW
AGVAERALRE DRLVWLTGRT ARMVLALPLL LMAVTIILPI PMGNVMPALA LIAASIGFMA
GDGLAVLVSM LIAMAAVVWT AVLLYTGAAA ADYAATLLTH LGLHLRSMMQ SLGVDLGLAA
GVATGCAVAA GLTALAFWVQ AARHRRRRRG LFDPTEDPRE RSRAMARRGR GLVAAATIAT
GAAAILIATR LMLTAWI
|
|---|
| |