| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5343 |
|---|
| Symbol | |
|---|
| ID | 5155873 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5569950 |
|---|
| End bp | 5570888 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 640560103 |
|---|
| Product | phospholipase C/P1 nuclease domain-containing protein |
|---|
| Protein accession | YP_001241227 |
|---|
| Protein GI | 148256642 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.690717 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.298135 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCAGGC TGACGATCGC ATTGGCCGCT GCGTTGCTGT GGCCGGCCGG ACAGGCGCTC
GCCTGGTGGG ACGAGGGCCA TATGCAGATT GCCTATGTGG CCTACAAGAA GCTGACGCCC
GCGGCGCGGG ACAGGGCGGA TGCGCTGCTC AAGCTCAACC CCGACTATTC CAGCTGGATC
GCTGGCGCGC CGGCGGGCCA GGAGAAGCTG TACGCCTTCG TCCACGCGGC GACCTGGCCC
GACGACATCA AGATGAAGAC GGACTATTAT GACGATCAGG TGACGGATTC GACGGCCAGG
CAGCTCGTTC CCTATGGCCA CCTCAAGCAC GCTTATTGGC ACTACAAGGA TACGCTGTTG
TCGGCGGACG AGACGCCGCT GCCGCGCCCG GATCCGGTCG ACGCGGTGTC GCAGCTCAAG
CTGATGATCG CCAAGCTGCC CGCGAACAGC GACGCCTCCG ATGCCCTGCG TTCATATAGT
CTGAGCTGGA TGATCCACCT GGTCGGGGAT CTGCACCAGC CGCTGCACGC CATCGCCCGC
TATTCGGCCG CCTTGCCGGA CAAGGGCGGC GACCGCGGCG GCAACGAAGT GCAGGTCGTC
GCCGCCAACG GCGAGAAGCT ACCGCTGCAC TTTTATTGGG ACAGGATCTT TGGCGGCTAT
TCCTCCGTGT TCGGCGCGAT CCGTGACGCC GACCAGGACA GCGGCCTGTC CGCGGTCGCG
CCGGATGCCG GAAAGGCCCA GATCGTCGAT CCCGCGACAT GGGCGCAGGA GAGTTTTGAG
CTCGCCAAGA CCGTCGCCTA CGCCCCGCCT GTGCGCGCCG ACAAGCAGCC GGCCGAGCTG
ACCCGCGACT ACGAGACCAA CGCCCGCGAG ACGGCGCGCA AGCAGGCCGC GCTCGCCGCC
GCACGGCTGG CCAATCTGCT CGAGGCGTTG CTGCGGTAG
|
|---|
| Protein sequence | MRRLTIALAA ALLWPAGQAL AWWDEGHMQI AYVAYKKLTP AARDRADALL KLNPDYSSWI
AGAPAGQEKL YAFVHAATWP DDIKMKTDYY DDQVTDSTAR QLVPYGHLKH AYWHYKDTLL
SADETPLPRP DPVDAVSQLK LMIAKLPANS DASDALRSYS LSWMIHLVGD LHQPLHAIAR
YSAALPDKGG DRGGNEVQVV AANGEKLPLH FYWDRIFGGY SSVFGAIRDA DQDSGLSAVA
PDAGKAQIVD PATWAQESFE LAKTVAYAPP VRADKQPAEL TRDYETNARE TARKQAALAA
ARLANLLEAL LR
|
|---|
| |