| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5329 |
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| Symbol | |
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| ID | 5155354 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5556736 |
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| End bp | 5559546 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640560091 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_001241215 |
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| Protein GI | 148256630 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.180092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.501472 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAACG TCGAAGATAC GCGGGAGATT TTTCTATCAG CAAGCCCTGC GACGCGCCGT
GACCAATTCG TTGCCCTCGC CGCTGTCGCG ATTTCCGCAA GCCTGTTCGT TGCCGCCGCT
CCCTTTGCCA AGGTGCAGCT CGCGGCGATG CCTGCATTCG TGGCGAGCTA TCAATCGGCG
CTGGCGCTGA ACGATCTGAT CACGGCGCTT CTGCTGTTCT CTCAATTCGT CCTGCTCCGC
TCGCGGGCCC TTCTCTGGCT CGCCAGCGGC TATCTGTTCA CCGCGCCGGC TGCGTTTCTG
CACACGCTGG CATTTCCTGG ACTGTTTTCG CCGACCGGCC TGATGGGCTC CGGACCGCAG
ACGGCGGTGT GGATCTACAT GATCTGGCAT GGCGGCTTTC CCTTGTTCGT CGCCGCCTAT
GCGCTGCACA GCCGCCGCTC GATCCACGAG TCGGTCCAAG ACTCGATCAA GCGCTCGTTC
CAAGTCGCGT CGGTGTCGAG ATCGCTGCTG CTCGCGATTG TCGGGGTCTC GATCGCGCTG
ACGACCCTGG TCTGGTTCGT GATCACCTAT GAGGCCGCGC TTCCCGCGCT CATCAGCGGC
GGAACCGCCA ATTTTGCCTT GAAGGTCGTG GTCGGCGCGA TCTGGTGCGT GACCCTGGCC
GCGCTGCTGC TGCTCGCTCA GCGACGGCCC TACACCATCC TCGATCTCTG GGTGATGGTC
GTGCTCTGCG CCTGGCTGTT CGATCTCGCG CTGTCCTCGC TGCTCAACGC CGCGCGGTTC
GATCTCGGCT ATTATGCCGG CCGGCTCTAC GGGCTGCTGG CAGCGAGCTT CGTGCTGGGC
GTTCTGCTCG CCGACAATGT CGGACTGCAG TCGAAGCTCA CCCGCCTCTT GCAGCAGCAG
CACCGACAAA GCCAGAACGA GCGGGCGCAT TTCATCGCCC GCGAAAGGCT GCTCAGCGCC
GTCGTCGAAT CGTCCAACGA CGCGATCATC ACGCTGACCC TGCACGGCAA GATCACGTCG
TGGAATCGCG CCGCGGAGCA GCTGTTCGGA TATGACGGCA GCGAGGCGCT GGGCAGCGAC
ATCGGGCTGA TCGTGCCTAC CGAGCGGCGC GGCGAGGTCG ATCGACTCCT CGAACGCATT
GGCCGGGGCG AGAAGATCGA GCATCACGAG ACCATGCGCC GTCACAAGGA TGGCCACGAG
CTCGACGTGT CGTTGAGCGT CTCTCCTGTT CTCGACGCAC GGGGCACCGT GATCGGCGCC
TCCAAGGTTG CCCGTGATAT CACCGAGAGC AAGCGGACTC GTCACGCGCT GAGCCGCGAA
ACCGAGGAGC GACGGCGCAT CTTCGAGACG TCGCAGGATC TCATCCTGAT TGCCGATTCG
CAGGGTACAT TGATCCAGGT GAGCCCGAGC GCGAACGCCA TCCTTGGCTA TCGGCCCGAG
GAGATGGTCG GTCGCGACGC CGGCGACTTC GTCTATCCGC CCGAGCTGGA GTCGTTTCGC
AGCCAGATGC TTGCCTGTCG GGGCGGACAC GACATCCACA ATTTCGAGGC CCAGTTCCTG
CACAAGGAAG GCCGTGCGGT CATCCTGAAT TGGATGGCGA GCTGGTCCGA GCCGGTGCAA
CGCCATTTCT TCATCGGGCG CGACCTCACG GAGAAGCGGG CCGCCGAAGC GCAGTTTCGC
CAGGCCCAGA AGATGGAAGC GGTGGGTCAA CTCACCGGCG GCGTCGCGCA CGACTTCAAC
AACATCCTGA CCGTGATCAC CGGCAGCATC GGCATCCTTG CCGAGTCCGT CGCCGATCGC
CCGGAGCTGG CGTCGCTGGC GAAGCTGATC GACGACTCCG CCGACCGCGG CGCCCGCCTC
ACGCAGCAAT TGCTGGCCTT CGCACGCAAG CAGCCGCTGC AGCCAGCAGA TATCGACGTG
AATGCGCTTC TGGTCGAGAC GGCCGATTTG CTGCGACCGA CACTCGGCGA GCAGATCGAG
ATCGAACGCA TCCTAGCGGA CGATCCGTGC ACGGCGCTGG CCGATCCGGA CCAGCTTGCC
ACGGCGATCG TCAATCTTGC GCTCAATGCC CGCGACGCGA TGCCGCAAGG CGGCAAGCTC
ACCCTGGAGA CCGCCAATGT CGCGCTCGAT CAGGATTACG CCAATGCCAA TAGCGAGGTC
GCGATCGGCG ACTATGTCAT GATCGCGGTC AGCGACACCG GCTGCGGCAT TCCGCCGGCC
TATCTCGACA AGGTGTTCGA TCCGTTCTTC TCGACCAAGG GCGTCGGCAA GGGCACCGGA
CTCGGCCTCA GCATGGTGTT CGGCTTCGTC AAGCAATCCG GCGGCCATAT CAAGATCTAC
AGCGAGGTCG GCCACGGCAC GTCGATCAAG CTCTATCTGC CGCGCTCGGC CGCGTCCTCA
ACGGCCGCCA CTGCCCGTCA TGACACGCCG GATTATCGCG GCGGCGACGA AACGGTCCTG
GTGGTCGAGG ATGACCCGCT GGTCCGGCAA CACGTCATCG CCCAGGTCAC GAGCCTCGGC
TACCGCACCC TGGCGGCAGG CAACGCGGCC GAGGCGCTCG ACGTGCTGGA GCGCCATCCG
GAGATCGACC TGTTGTTCAC GGACGTCATC ATGCCCGGCG CCATGAACGG GCGGCAGCTC
GCCGAGGCGG CCCAGAAGCA GCGGCGCAGC CTGAAAACGC TCTTCACGTC CGGCTATACC
GAGAATGCGA TCGTGCATCA CGGCCGCCTC GACGCCGGCG TGCTGCTGCT CGCCAAGCCC
TATCGCAAGC CGGAACTCGC CCGCATGATC CGCATCGCCC TGGACGCGTG A
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| Protein sequence | MQNVEDTREI FLSASPATRR DQFVALAAVA ISASLFVAAA PFAKVQLAAM PAFVASYQSA
LALNDLITAL LLFSQFVLLR SRALLWLASG YLFTAPAAFL HTLAFPGLFS PTGLMGSGPQ
TAVWIYMIWH GGFPLFVAAY ALHSRRSIHE SVQDSIKRSF QVASVSRSLL LAIVGVSIAL
TTLVWFVITY EAALPALISG GTANFALKVV VGAIWCVTLA ALLLLAQRRP YTILDLWVMV
VLCAWLFDLA LSSLLNAARF DLGYYAGRLY GLLAASFVLG VLLADNVGLQ SKLTRLLQQQ
HRQSQNERAH FIARERLLSA VVESSNDAII TLTLHGKITS WNRAAEQLFG YDGSEALGSD
IGLIVPTERR GEVDRLLERI GRGEKIEHHE TMRRHKDGHE LDVSLSVSPV LDARGTVIGA
SKVARDITES KRTRHALSRE TEERRRIFET SQDLILIADS QGTLIQVSPS ANAILGYRPE
EMVGRDAGDF VYPPELESFR SQMLACRGGH DIHNFEAQFL HKEGRAVILN WMASWSEPVQ
RHFFIGRDLT EKRAAEAQFR QAQKMEAVGQ LTGGVAHDFN NILTVITGSI GILAESVADR
PELASLAKLI DDSADRGARL TQQLLAFARK QPLQPADIDV NALLVETADL LRPTLGEQIE
IERILADDPC TALADPDQLA TAIVNLALNA RDAMPQGGKL TLETANVALD QDYANANSEV
AIGDYVMIAV SDTGCGIPPA YLDKVFDPFF STKGVGKGTG LGLSMVFGFV KQSGGHIKIY
SEVGHGTSIK LYLPRSAASS TAATARHDTP DYRGGDETVL VVEDDPLVRQ HVIAQVTSLG
YRTLAAGNAA EALDVLERHP EIDLLFTDVI MPGAMNGRQL AEAAQKQRRS LKTLFTSGYT
ENAIVHHGRL DAGVLLLAKP YRKPELARMI RIALDA
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