| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5273 |
|---|
| Symbol | |
|---|
| ID | 5155951 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | + |
|---|
| Start bp | 5501929 |
|---|
| End bp | 5503347 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 640560040 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001241164 |
|---|
| Protein GI | 148256579 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2308] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 0.257497 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGTTG CGTTCGACGA AATGAACGAG CCGGGCGGCG ACGTCCGTCA GGCCTATCAG
GAGCTGTCGC GGTGGCTGAA GGAAACGCCA CCGGAGGCGC TGGAATATCG CCGCCATGAA
GCGGAGCTGT TGTTCCGCCG AATCGGCATC ACCTTCGCCG TCTATGGCGA AGCGGAGGCG
CAGGAGCGGC TGATCCCGTT CGACGTCATC CCGCGGATCC TCTCCGGCAA GGAATGGGCG
CTGCTGGAGA AGGGGCTGAA GCAGCGCGTC AAGGCGCTGA ACATGTTCCT GCGCGATATC
TATCACGGCC GCGACATCCT GCGCGCCGAT GTCGTGCCGG ACGACCTGAT CTTCCAGAAC
CCGGTATTCC GTCCGGAGAT GAACGGCCAG GACGTGCCAC ACGACGTCTA TGTCCACATC
GCCGGCATCG ATATCGTCCG CGTCGACGCC AACGACTTCA TCGTGCTCGA GGACAACGCG
CGCACGCCCT CGGGCGTGTC CTACATGCTG GAAAACCGCG AGATCATGAT GCGGCTGTTT
CCGGACCTGT TCGCGCGCCA CCGCGTCGCC CCGGTCGAGC GTTATCCGGA CGAATTGTTG
TCGGCGCTGC GCTCGGTGGC GCCGCTCAGC GCCTCGGCCG AGCCGACGGT CGCGCTGATG
ACGCCCGGCA TCTATAATTC CGCCTATTAC GAGCACTCGT TCCTGGCCGA CAAGCTCGGC
ATCGAACTGG TCGAGGGCCG CGACCTCATC GTCAAGAACG AGGAGGTTTT CATGCGGACG
ACGGAGGGCC TGAAGCGGGT CGACGTGATC TATCGCCGCG TCGACGACGA CTTCCTCGAT
CCTCTCACCT TCCGGCCGGA TTCGGCGCTG GGCGTGCCCG GCCTGATGTC GGCCTATGCC
GCCGGCAACG TCACGCTCGC CAATGCGGTG GGCACCGGCA TCGCCGACGA CAAGGCGATC
TATTCCTACA TGCCGGACAT CGTGAAGTTC TACCTGGACG AGGAGCCGAT CCTGAAGAAC
GTCCAGACCT GGCGCTGCCG CGAGCCGCAG GATTTGTCCT ACGTGCTCGA CCATCTCGGC
GAGCTCGTCG TCAAGGAGGT GCACGGCTCC GGCGGCTACG GCATGCTGAT CGGACCGGCC
GCGACCAAGG CCACGATCGA GGCGTTCCGC GACAAGCTGA AGCGCGAGCC GGAGGGCTTC
ATCGCCCAGC CGACGCTCGC ATTGTCCACC TGCCCGACCT GCGTCACCTC CGGGCTTGCG
CCGCGGCATG TCGATCTGCG TCCGTTCGTT TTGACCGGGC GCGACCGCAC CACCATCGTG
CCTGGCGGCC TGACCCGCGT GGCGCTGAAG GAGGGATCGC TGGTGGTGAA TTCCAGCCAG
GGCGGCGGCA CCAAGGACAC ATGGGTGCTG GATGAGTGA
|
|---|
| Protein sequence | MAVAFDEMNE PGGDVRQAYQ ELSRWLKETP PEALEYRRHE AELLFRRIGI TFAVYGEAEA
QERLIPFDVI PRILSGKEWA LLEKGLKQRV KALNMFLRDI YHGRDILRAD VVPDDLIFQN
PVFRPEMNGQ DVPHDVYVHI AGIDIVRVDA NDFIVLEDNA RTPSGVSYML ENREIMMRLF
PDLFARHRVA PVERYPDELL SALRSVAPLS ASAEPTVALM TPGIYNSAYY EHSFLADKLG
IELVEGRDLI VKNEEVFMRT TEGLKRVDVI YRRVDDDFLD PLTFRPDSAL GVPGLMSAYA
AGNVTLANAV GTGIADDKAI YSYMPDIVKF YLDEEPILKN VQTWRCREPQ DLSYVLDHLG
ELVVKEVHGS GGYGMLIGPA ATKATIEAFR DKLKREPEGF IAQPTLALST CPTCVTSGLA
PRHVDLRPFV LTGRDRTTIV PGGLTRVALK EGSLVVNSSQ GGGTKDTWVL DE
|
|---|
| |