Gene BBta_5238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5238 
Symbol 
ID5154414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5462271 
End bp5462648 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content68% 
IMG OID640560008 
Producthypothetical protein 
Protein accessionYP_001241133 
Protein GI148256548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.155796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACA ACATGTCGAC GGCTTTCGCC GATCCGGCCA AATACGATCT GTACGACTGC 
AAGCAGCTCG AAACCGAGCG CAAGTCGCTG GCTGCGCGCA CCGCCGAGTT GCAGGGCCTG
ATGGCCAAGG CGGAGACCGG GACCGGCGGT GTCGTGGTGG CAGAGCTCGC TTATCGCAAC
GATTACGTCG CGATCCGCGG CCAGTCGCAA TTCGCCGAAG AGGCGTGGCG CCGCAACAAG
TGCCAGGAAA GCCCGCCGCC GGCGCCTGCG GCCGCCAAGG GCGGCAAGCC GGCCAAACCG
GCGCGTCCGG CGCGGCCGAT GGCCTCCACC GGTTCGACCG GTCCTTCGAC CCTGCCGCGG
GACGGTTCGG TCTATTGA
 
Protein sequence
MSDNMSTAFA DPAKYDLYDC KQLETERKSL AARTAELQGL MAKAETGTGG VVVAELAYRN 
DYVAIRGQSQ FAEEAWRRNK CQESPPPAPA AAKGGKPAKP ARPARPMAST GSTGPSTLPR
DGSVY