Gene BBta_5178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_5178 
Symbol 
ID5154089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5407689 
End bp5408177 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content62% 
IMG OID640559952 
Productputative response regulator receiver (CheY-like protein) 
Protein accessionYP_001241077 
Protein GI148256492 
COG category[T] Signal transduction mechanisms 
COG ID[COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.075348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value0.843647 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGTA TCCTGCGCAC GCTGTTGCAC TCGTTCGGCG CCCGCGAGGT CAATGAAGCC 
GAGGACGGCG CCACCGCGCT CGAAATGTAC ACCCATTTCT CGCCCGATAT TGTGATCACC
GATTGGGCGA TGCCGATCTT CGACGGCCTG GAACTGGCAC AGATGATTCG CCAGCCGGAA
GCCAAGGGCA ATCCTTATGC CCCGATCATC ATGCTGACAG GGCATTCGGA GAAGCGCCGC
GTGACGGTGG CGCGCGATGC CGGCGTGACC GAGTTTCTGG CCAAGCCGAT CTCGGCCAAG
GGCCTCTACC AGCGCATTCT CAACGTGGTC GCCAATCCCC GGCCCTTCAT CAAGACCAAG
ACCTATTTTG GACCGGACCG GCGCCGCAAC ACCAACACTG CCTATATCGG CCCCGAGCGC
CGCGTCGGCG GCGAGGCGGA GATCTTCCAG CAGCCATCAC TTCTGGATAA AGCGCGCTCC
GCAGTTTGA
 
Protein sequence
MRRILRTLLH SFGAREVNEA EDGATALEMY THFSPDIVIT DWAMPIFDGL ELAQMIRQPE 
AKGNPYAPII MLTGHSEKRR VTVARDAGVT EFLAKPISAK GLYQRILNVV ANPRPFIKTK
TYFGPDRRRN TNTAYIGPER RVGGEAEIFQ QPSLLDKARS AV