| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_5100 |
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| Symbol | |
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| ID | 5152107 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bradyrhizobium sp. BTAi1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009485 |
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| Strand | + |
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| Start bp | 5325198 |
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| End bp | 5325983 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640559876 |
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| Product | putative short-chain dehydrogenase/reductase SDR family protein |
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| Protein accession | YP_001241004 |
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| Protein GI | 148256419 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.917841 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.678944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCGTC TCGAGGGAAA ATCCGTCATC ATCACCGGCG CCGGCAGTGG CATCGGCCGC
GCCGCATCGC TGCTGTTCAC ACGCGAAGGC GCGCGGCTCA TCGCGGTCGA TCGCAGCGAG
GCCGTCAAGG AGACGGTCGA GCTCGTCAAG CAGCAGGGCG GCATCGCCGA AGCCGTGCTC
GCCGACGCCG GCTCCGAGGC CGACGTCTCC GGCTTCATCG ATCGCGCGGT CGCGACCTTC
GGCAAGCTCG ACGTGATCTG GGCCAATGCA GGCATCTCCG GCGGGCTCAA GCCGATCGCC
GAGCAGACGG TCGAGCATTG GCAGGAGATC CTGCGCATCA ATTTGATCGG CCCGTTCCTG
GCGGTGAAAT ACGCGATGCC GCACATGGTG CGCCAGCAGC GCGGCGCCAT CGTCTGCACG
GCCTCGGTCG CTGGTTTGAA GTCCGGTGCC TCGGGCCATC CCTACGCGGC GAGCAAGGCC
GGCGTCATCA GCCTGGTGCA GACCACGGCC TATTCGCTGT CCGGCACCGG CGTGCGCATC
AACGCGGTCT GTCCGGGGCT GATCGAGACC GGCATGACCA AGCCGATCTT CGACGGCGCC
AAGGAGCGCG GCACCGAGGG CAAGATCGGC CAGCTCAATC CGCTGAAGCG CGCCGGCCAG
CCGCACGAGA TCGCCGCCAT GGGCCTGTTC CTCGCCAGCG ATGAAGCCTC CTACGTCAAC
GGCCAGGCCT TCCCGGTCGA CGGCGGCCTG ACCGCGTCGA TGCCGTATGC GGGCAAGCCG
ATCTAG
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| Protein sequence | MGRLEGKSVI ITGAGSGIGR AASLLFTREG ARLIAVDRSE AVKETVELVK QQGGIAEAVL
ADAGSEADVS GFIDRAVATF GKLDVIWANA GISGGLKPIA EQTVEHWQEI LRINLIGPFL
AVKYAMPHMV RQQRGAIVCT ASVAGLKSGA SGHPYAASKA GVISLVQTTA YSLSGTGVRI
NAVCPGLIET GMTKPIFDGA KERGTEGKIG QLNPLKRAGQ PHEIAAMGLF LASDEASYVN
GQAFPVDGGL TASMPYAGKP I
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