| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4962 |
|---|
| Symbol | |
|---|
| ID | 5153407 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5199300 |
|---|
| End bp | 5202710 |
|---|
| Gene Length | 3411 bp |
|---|
| Protein Length | 1136 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640559752 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001240881 |
|---|
| Protein GI | 148256296 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGACA CTCTGGCCGC CGCCTCGATC CCTCCGGTTT CAGCATCGAT CGGAAACCTA
ACGTCTCTGA AACCTTATCC GGGCCTGAGG AGCTTCACGC AGGACGAAGC CTTGCTCTTC
TTCGGTCGAG AAGTGCAGGT GCGCCAGATA CGCGACATCC TCGCGAATCG CAATCTACTG
GTCGTGCTCG GCGGATCCGG CTCCGGCAAA TCCTCCCTGG TGCGCGCGGG CCTGCTGCCG
AAGCTCAACA GCACGGCTCC CATTCCGAAG CGGAGCGGAG CCTGGTATGC GGTCGAATTC
CGTCCATTGA CCAATCCCAT TGCAGAGCTT TTCGAGGCCA TATTCGTACA GATCTTTCAG
CCGCTGTTGA ATACGCCCTC TTCCGTCGCG GGGACGGGAA CGGAAGGCCA GCCGACGCAG
ACCGGTTTGG AAGAAAACAG GCGCCTCGCG GCTGTAAGTG CTGCATTGGA TATCGACCCT
GCACTCCAGC CGAGCGAAGA CATCGAGAAA CGATGCAGAG AGCGGCTGCG AGAGCGTCTG
TTCAAAGGTC GGACGATCGA CATCGGCTCG CTTTTCGCAT TTGCTGAGCA AACAATCGTA
GTTCTCGACG AGAAGCTTGC CGCGGGCCCT CGCTCGGGGA AAGCGAATCT TCTGATCCTG
ATCGACCAGT TTGAGGAAGT CTTCTCATTG CCGGCCGAAA ACAGGGAAGA CGGGCAGAGC
ATGGTGATGT CGCTCGTTAC CGGCATCCAG GCATTCCGGC CCGACAACCT TTTCCTGATC
GTCACGATGC GGAACGAGTG GCTGCACCGA TGCAGCGAGA TTCCCGGAGT GGCCGAAGCG
ATGAACGGCT CGACCTATCT GGTCGATCTT CTGAACGATT CCGAAATCAG AAACATCATT
GTCGAACCGG CCCGTTCGGT CCTGCGCGCG GCGAGACTCG ATCCGGGGCC GTCCAGTCGC
GGACCCTATT CCCTAGACGT ACTTCGCCTC CTCCAGCAAG CCTTCGACGA TACCGCAGCC
GTGCCGGATG CGTCGGATCG CCTTCCGCTC CTGCAGCACT TGCTGCAGCT GCTGTGGGAC
AGCGCGGATC CGACCAGGCC CCACTTTTCG ATCGAGACCA GACACCTCGA AGCGATACCA
GGCTGGGAAG AGAAAGCAGG CTGGAAGTTG AAGGGACTTC CCGGTTGCCT CAACGCCCGC
GCCGGACAGG TCTTGAAAGC CGCCGTCGAG GCCGCGTCTC AGTCTTCGCC TCTGCTCGGC
AAAGACGGCG CCGAAAAGCT GATTCGGTCT GCGTTCGTCA GCCTTGCAAT CCTCGACGAG
AAAGGGATCG TTCGGCGCAA TCTCGTGACC ATCGACGAGA TACTCGACTC AAGCGGCTTG
GTCGAACGGG CCACCCGCAG CAACAGGACA GAGACTCGAT ATGTGCTCGC AGGTTGGCGC
ATTGACGCGA CCACGGTCGA GAAACCCGAC TCAGCTGAGG AGTCCGAACG GGCCGCTCGC
AACCTGGCAG AGATTCGAAA TGCGCTCATA GGGATGCTCG CGCAGTTCAA GGCGGCTTCG
CTGGTCGGCT CCAAGCAGAC AGCCAAGGGC GAACTCTTCG ATATCAATCA CGAAGCGCTG
GTTCGAAACT GGGATACCTG CGCCAGCTGG ATCAGCCAGG CAAAACTAGT CAAGGATCGG
CTGCGCGCCA TCGACGAGAA GATCCGACAG ACAAACGTCG CGCAAAAAGG TTGGCTTGCG
CGGTTCACCA ATCTGCTGTT CGCAACTGAT CTCAGCTCGG CCCACGAGCA GGTCGGAAGC
GAAACGGCCA AAGCCCTCCG CGACGACGTG TTCGGCGATC AGGCGACTTT TAGCAAATCC
TGGGCGCGGC ACGTTCTGGG GAACGACAAT GTGGCTCAAA TTGGCCACCG CGTTGCCGAT
GCACAGCGCT TCGTTGACAA TCCGCTGCAT AGATACCGCC CGCTGGCAGT GTTCATCGCT
GCGCTTGCTT TGGCCGGACT TTTGACCATC GTCACTAGGC AGCTATTTAT TCGCGATATG
GAGCAGTTCG TTAATCTTCA GAGCATCGTC CGACGGACCG ACCTTTCCCA GGGAACCGTT
ACGCCGGCCG GACCGCCTGA GACTTACGCA ACATTCAAAA TTGCATTTGG CAAACTGAAC
AGAGTACTCA CACCCGATGT CATGCGACGG CCTTTGGCCG ATATGCTTGT CGGCCTCGAG
GGAAACTGGA GGTCGCATTT TGGGCGCTCC ATATGGCTCA AATCTTCGGC GGCACAACAT
CCGACCTCGA TGAGCCTCCA CGGATCAGTG GAGAGCAAGA AGGCGATTTG CATCACCCCG
CGCCCGGAGA GAAAGCTACA AATCCGGAAG GATGAGCGAA CCCAAAAGAA CGAACTCGAA
TGGGGCGCGG TCCAAATAGG CTCCAAAACA GATTCGGGGT CTGTCCAAGC CGCTCAGAAG
ACGGTCTGGA GACCAACAAC TCCAGCAATC GACAAGGAAC CGACAGTCAA ATCGAATCTA
TACGGCGGAG AGGAATGGCC CGATGGCTCG GTGGTCTGCA CGTCTCCCGA CGGAAGGTGG
CAGCTGAAAT GGATCAATGA TAAGCCTACT CCGAAATGGC CTTCCATCCG CTATACCCTG
GTGAACAAGC TGACACCGCC TCAAGGCGAG CCAGGATTCT ATGTTGAGGT AGGGAGCGAG
CGATACTTCA CTGACGAGCA AACGAGCGGT GCATACGGAC GCGAGCTTCA ATCGTCGCTT
CCGACCGTGT CAGACAGTGT AAGCAATCCC GGGAACACAA ATACCAAGGC CATTCAATTT
GTGCGCGATG GGCATTGGGT CGGCTTCTCG ATCCCGGTGG AGGGCGGCAA GGCCGTTACG
CTATGGACCA CCGAAGGCAT CGCTGAACCG CAGGAAACCT ATGCACCTCC AAGCAGCAGC
AAGCCTTGCG CACGGAAAAA TGGCGACCTG CTTCGCTGTA CGATTGGGTC TCTCACGTAC
GGCGAGAATG TCTATGATGT CCGGGTAACT TCCTTTCCCC CAAGCCAGGA TTCGCCAGAT
TGCTTCTCTG CGGGGTCAAC CTGCGCAACG TTCATCGATC TCCTTTTCGT CGATCAATCG
ACTGACAAGG TCGGTCAACC GGCTGACAAG AAAGTCCGCG CGGTCGATCC ACAAGACGAC
ATCATCAGTG CCAGATTAAG CTTCCCCAAG AGGCAGATCA AAAGCGGAAC AATCACCGCG
GAGGGTTATC TGGTTTTGAC GGATATCGCT AACCAGACGT GGCGGTATTT GATCGACGGC
AACAAGCTGG CCGAGCTGCA AAAGGATACA TGGCGCGAGA GCAATCTCGA AAACGCTGCG
TGGAGCGCTC CCTGCAGGAA GTTGCAATGC GACGACATGA TCCGGCGCTG A
|
|---|
| Protein sequence | MTDTLAAASI PPVSASIGNL TSLKPYPGLR SFTQDEALLF FGREVQVRQI RDILANRNLL
VVLGGSGSGK SSLVRAGLLP KLNSTAPIPK RSGAWYAVEF RPLTNPIAEL FEAIFVQIFQ
PLLNTPSSVA GTGTEGQPTQ TGLEENRRLA AVSAALDIDP ALQPSEDIEK RCRERLRERL
FKGRTIDIGS LFAFAEQTIV VLDEKLAAGP RSGKANLLIL IDQFEEVFSL PAENREDGQS
MVMSLVTGIQ AFRPDNLFLI VTMRNEWLHR CSEIPGVAEA MNGSTYLVDL LNDSEIRNII
VEPARSVLRA ARLDPGPSSR GPYSLDVLRL LQQAFDDTAA VPDASDRLPL LQHLLQLLWD
SADPTRPHFS IETRHLEAIP GWEEKAGWKL KGLPGCLNAR AGQVLKAAVE AASQSSPLLG
KDGAEKLIRS AFVSLAILDE KGIVRRNLVT IDEILDSSGL VERATRSNRT ETRYVLAGWR
IDATTVEKPD SAEESERAAR NLAEIRNALI GMLAQFKAAS LVGSKQTAKG ELFDINHEAL
VRNWDTCASW ISQAKLVKDR LRAIDEKIRQ TNVAQKGWLA RFTNLLFATD LSSAHEQVGS
ETAKALRDDV FGDQATFSKS WARHVLGNDN VAQIGHRVAD AQRFVDNPLH RYRPLAVFIA
ALALAGLLTI VTRQLFIRDM EQFVNLQSIV RRTDLSQGTV TPAGPPETYA TFKIAFGKLN
RVLTPDVMRR PLADMLVGLE GNWRSHFGRS IWLKSSAAQH PTSMSLHGSV ESKKAICITP
RPERKLQIRK DERTQKNELE WGAVQIGSKT DSGSVQAAQK TVWRPTTPAI DKEPTVKSNL
YGGEEWPDGS VVCTSPDGRW QLKWINDKPT PKWPSIRYTL VNKLTPPQGE PGFYVEVGSE
RYFTDEQTSG AYGRELQSSL PTVSDSVSNP GNTNTKAIQF VRDGHWVGFS IPVEGGKAVT
LWTTEGIAEP QETYAPPSSS KPCARKNGDL LRCTIGSLTY GENVYDVRVT SFPPSQDSPD
CFSAGSTCAT FIDLLFVDQS TDKVGQPADK KVRAVDPQDD IISARLSFPK RQIKSGTITA
EGYLVLTDIA NQTWRYLIDG NKLAELQKDT WRESNLENAA WSAPCRKLQC DDMIRR
|
|---|
| |