Gene BBta_4893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBBta_4893 
Symbol 
ID5150218 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBradyrhizobium sp. BTAi1 
KingdomBacteria 
Replicon accessionNC_009485 
Strand
Start bp5132251 
End bp5132679 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content66% 
IMG OID640559691 
Producthypothetical protein 
Protein accessionYP_001240821 
Protein GI148256236 
COG category[R] General function prediction only 
COG ID[COG1942] Uncharacterized protein, 4-oxalocrotonate tautomerase homolog 
TIGRFAM ID[TIGR00013] 4-oxalocrotonate tautomerase family enzyme 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.364576 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.116041 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCTGA TCACCATCGT CTATGCCAGC CAGCGCCGCT CCCTTTCGCT GAAGCGGGAG 
ATTGCCGAGG CCGTCACCGC GCTGACGGCA CAGATCCTGC GCAAGGCCCC CAAGGTCACC
GCCGTCATCG TTTCGGAGGC CGATGCGGCG GACTGGTTCG CCGGCGGCGC CTCGCTGGCC
GAGCAGGGGC TTGCCAGCTA TTGGATCGAC GTCCATGTCA GCGAAGGCAC CAACACCAAG
GACGAGAAGG CCGCTTATCT CGCGGCGGTG TTCGACCGCA TGGCGTCGCT GATCGGCCCG
CTGCATCCCG AGACCTATCT GCATGTCGAC GAGGTGAGGG GAGATGCCTA TGGCTTCGGC
GGGCTGACCC AGGAGCGCCG CTATGTCGCA GCCAGCCTCG GTGTCCCGGC GCATCAGCGC
GAGGTCTGA
 
Protein sequence
MPLITIVYAS QRRSLSLKRE IAEAVTALTA QILRKAPKVT AVIVSEADAA DWFAGGASLA 
EQGLASYWID VHVSEGTNTK DEKAAYLAAV FDRMASLIGP LHPETYLHVD EVRGDAYGFG
GLTQERRYVA ASLGVPAHQR EV