Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BBta_4861 |
Symbol | |
ID | 5154539 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bradyrhizobium sp. BTAi1 |
Kingdom | Bacteria |
Replicon accession | NC_009485 |
Strand | + |
Start bp | 5104851 |
End bp | 5105837 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640559659 |
Product | putative ABC transporter, permease protein |
Protein accession | YP_001240790 |
Protein GI | 148256205 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.373975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.482234 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACCA TGACCCGTCT TGCCAAGGTG CTGCGGCGGA CCACGCTGCA GGCGGTGCCG ACCGTCATCG GCATCGTCAT CCTCAACTTC CTGCTGCTGC AGCTGGCTCC GGGCGATGCC GCCGACGTGC TCGCCGGCGA GTCGGGGTCG GCGACCATGG AGACCGTTGC GGCCCTGCGC GCGCGGTTCG GATTGGATCA GCCGGTGCTG GTTCAGCTGA TCGCCTATCT CGACAACCTC GCCCATTTCA GCCTCGGCTT CTCGCCGCGC TACAATCTGC CGGTGTCGGA CATCATCGCG CAGCGGCTGC CGGGCACCGT CATCCTGATG CTGACGGCGC TGGCGCTCGC CCTCGCCTTC GGCATCACGC TCGGCACCGT GATGGCGACC TATGCCGGAC GCTGGCCGGA CCGGCTGATC TCGGTCGGCA TCACGCTGTT CTATTCGATC CCCGGCTTCT GGATCGGCCT GATGCTGATC CTGCTGTTCT CGGTCAAGCT CGGCTGGCTG CCGAGCGGCG GCTCCGGCAC CATCGGCACC ACTGTCAGCG GCTTCGCGCT CGTCATCGAC CGGGCGCGCT ACATGGTGCT GCCGGCGCTG TCGCTCGCAC TGTTCTACAT CGCGATCTAT TCGCGGCTGA CGCGCGCGGC GATGCTCGAT GCGCAGACCC AGGACTATGT CCGCACCGCC GCGGCCAAGG GCCTCTCGCC GTTCGCGATC ACCTTCGGCC ACGTGCTGCG CAACGCCCTG CTCCCGGTGA CGACGGTGGC CGGCATGCAT CTCGGCGGCC TGCTCGGCGG CGCCGTCGTC GTCGAGACCG TGTACAGCTG GCCCGGGCTC GGCCGCCTCG CCTTCGAGGC GGTGATGAGC CGCGATTTCA GCGTGCTGCT CGGCATTCTC CTGCTGTCCT CACTGCTCGT GATCATCGCC AATGTGACGG TCGATCTCGT GCAGGCCTGG CTTGACCCGC GTATCGAGAC CCGCTGA
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Protein sequence | MSTMTRLAKV LRRTTLQAVP TVIGIVILNF LLLQLAPGDA ADVLAGESGS ATMETVAALR ARFGLDQPVL VQLIAYLDNL AHFSLGFSPR YNLPVSDIIA QRLPGTVILM LTALALALAF GITLGTVMAT YAGRWPDRLI SVGITLFYSI PGFWIGLMLI LLFSVKLGWL PSGGSGTIGT TVSGFALVID RARYMVLPAL SLALFYIAIY SRLTRAAMLD AQTQDYVRTA AAKGLSPFAI TFGHVLRNAL LPVTTVAGMH LGGLLGGAVV VETVYSWPGL GRLAFEAVMS RDFSVLLGIL LLSSLLVIIA NVTVDLVQAW LDPRIETR
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