| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BBta_4797 |
|---|
| Symbol | |
|---|
| ID | 5154197 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bradyrhizobium sp. BTAi1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009485 |
|---|
| Strand | - |
|---|
| Start bp | 5021558 |
|---|
| End bp | 5023054 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640559596 |
|---|
| Product | putative amidase |
|---|
| Protein accession | YP_001240727 |
|---|
| Protein GI | 148256142 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.199104 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCATCGA TTTGCGACAA CACCGCCAGC GATCTGGTCA AGCTCCTGAA AACAAAGGCG
ATCTCCCCCG TCGCTTTGCT CGATTCGTGC CTCGAACGGA TCGCCGCGGT CAATCCGGCG
GTCAATGCTG TCGTGACCCT GGACGAGGCG GGCGCCCGGG CGGAGGCCAA GGCCGCCGAG
GCCGAGCTCG TCAGGGGCGA GGACAAGGGG CCGCTGCACG GCCTGCCGGT GCTGATCAAG
GACACCCAGG ACACCGCCGG GATGCGCTCC ACCTATGGCA GCCCGATCCT GGCCGACAAT
GTACCGGTGG CCGACCAGGC GTCGGTGGCG CGGCTGCGTG CGGCGGGCGC CATCATCTTC
GGCAAGACCA ACACGCCGGA ATGGGCGGCG GGCGGCAACA CGCGTAATCC CGTGTTCGGC
GCCACCGGCA ATCCGTTCGA TCCGCTGCGC TCAGCCGCCG GCTCCTCCGG CGGCTCGGCG
GCGGCTTTGG CCTGTGGCAT GGCGCCGTTG GCCTCGGGCT CCGACACCGG TGGCTCCTTG
CGCAATCCGG CCGGCTTCTG TGGCATCGTC GGCATGCGGC CGTCCTACGG GCTCGTCGCC
AGCGACAAGC GCGCCCATGG CTGGTCGTGC CTGTCGACCG ACGGACCGAT GGCGCGCAAT
GTGGCCGATA CGGCGCTGAT GCTGTCAGTG ATGGCGAGCG ACGATACGCG CGATCCGCTT
GCCTACACGC TGCCCGGCGA GGCGGTGCGT GGCACACCCG CGCGCTGGGC CGTGCCGCCG
GCCATCGACC TCGGCAGGCT GCGCCTCGCC TTCACCGAGG ATTTTGGTTT TGCGCCGACG
GAAGCGCTGA TCCGCCGCGC CTTTCGCGCG CGGGTGAGGC GCATCGCGCC GCTGTTTGCG
GACGCCAGCG AAGCGACACC CGATTGCAGC GGCGCCGACG AGACCTTTGC GGTGCTGCGC
GCCTCGCTGT TCCTCACCCA GCATGGCAAG AATTATCGCG AACGGCCTGA GATGCTGGGG
CCGAATGTCC GCGCCAATGT CGAGGAGGGG CTGTCCTACA GCCTCGAGGA TTTTTCGCGC
GCGGCGGCCA ACCAGACCAG CATCTACCGC GCCTATCAGA GCTTCTTCGC CGCGCATGAT
GTGCTGATCA GCCCGACCAT CACGCTCAGC CCGCGGCCGT GGTCCGAGCT CTATCCGGCC
GAGATCGACG GCGTGCCGAC CAGATCCTAC TTCCATTGGC TGGCGCTGGC CTATGCGGTG
ACGCTCGCCG GCCATCCCGC GCTGAGCCTG CCGCTCGGCC GCGACGAGAA CGGCTTGCCG
TTCGGTCTGC AGATCGTCGG CCCGCGGGGC GGCGATGCGC TGGTGCTCGG CATTGCCGCG
GCCCTGGAAC AGGCTTTCGC TGGCGACGCC GAATTGTGCC GGCCGCAGCC GGATCTCGCC
GGGCTCGCCG CGCTGCCGCC GCTGGCCCAG GCGCCCGGCT TCATGGCGTG GGATTGA
|
|---|
| Protein sequence | MASICDNTAS DLVKLLKTKA ISPVALLDSC LERIAAVNPA VNAVVTLDEA GARAEAKAAE
AELVRGEDKG PLHGLPVLIK DTQDTAGMRS TYGSPILADN VPVADQASVA RLRAAGAIIF
GKTNTPEWAA GGNTRNPVFG ATGNPFDPLR SAAGSSGGSA AALACGMAPL ASGSDTGGSL
RNPAGFCGIV GMRPSYGLVA SDKRAHGWSC LSTDGPMARN VADTALMLSV MASDDTRDPL
AYTLPGEAVR GTPARWAVPP AIDLGRLRLA FTEDFGFAPT EALIRRAFRA RVRRIAPLFA
DASEATPDCS GADETFAVLR ASLFLTQHGK NYRERPEMLG PNVRANVEEG LSYSLEDFSR
AAANQTSIYR AYQSFFAAHD VLISPTITLS PRPWSELYPA EIDGVPTRSY FHWLALAYAV
TLAGHPALSL PLGRDENGLP FGLQIVGPRG GDALVLGIAA ALEQAFAGDA ELCRPQPDLA
GLAALPPLAQ APGFMAWD
|
|---|
| |